Gene Dd1591_4179 details

Gene Information

• Locus tag: Dd1591_4179
• Symbol: trkD
• ID: 8117629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: -
• Start bp: 4720861
• End bp: 4722729
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644854559
• Product: potassium transport protein Kup
• Protein accession: YP_003006454
• Protein GI: 251791733
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3158] K+ transporter
• TIGRFAM ID: [TIGR00794] potassium uptake protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.418392
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCAG AACATAAACG TTCACTTCCA GCGGTCACGC TGGCTGCCAT CGGGGTTGTG 
TATGGCGATA TCGGCACCAG CCCGCTTTAT ACGCTGAGGG AGTGTCTTTC CGGACAGTTT 
GGCTTTGGGG TGGAACCTGA TTCCGTCTTT GGCTTTCTCT CTCTGATCTT TTGGCTGCTG 
GTACTCGTCG TCTCTCTTAA GTATCTCAGC TATGTCATGC GCGCCGATAA CGCCGGTGAA 
GGCGGTATTT TAACGCTGAT GTCGCTGGCG GGGCGCAATA CGTCCGATAA GGTTACCGCG 
ATGGTGGTGA TCATGGGATT GATCGGCGGC AGCTTTTTCT ATGGTGAGGT GGTGATCACG 
CCGGCGATCT CCGTGATGTC GGCGATCGAA GGGCTGGATA TCGTCGCCCC GTCGCTGGAT 
ACCTACATTG TCCCTATTTC GATCGTCGTT CTGACATTGC TGTTTATGAT TCAGAAGCAC 
GGTACCGGCA GAGTCGGCAG CCTGTTTGCC CCAATCATGA TGCTGTGGTT TTTGTCGCTG 
GGCGTGTTGG GGGCTCGTAG CATTATTGCC AATCCGGAAG TGTTGCAGGC GCTGAATCCC 
AAATGGGCGA TTAACTTCTT CATTCAGTAC AAAGCGGTGT CTTTCTTTGC GCTGGGCGCG 
GTGGTGCTGT CTATTACCGG TGTGGAAGCG CTGTATGCCG ACATGGGGCA CTTTGGCAAA 
CTGCCGATTC GTATCGCCTG GTTTTCTGCG GTGTTGCCGT CGCTGGTGCT TAACTATTTC 
GGTCAGGGCG CGCTGCTGCT GAAAAATCCG GAAGCCATCA AAAACCCGTT CTTTCTGCTG 
GCGCCGGATT GGGCGCTGAT TCCACTGCTG GTGCTGGCTA CGCTGGCTAC CATCATCGCT 
TCTCAGGCGG TGATTTCAGG GGTGTTCTCG CTGACTCGCC AGGCGGTGCG TCTGGGGTAT 
CTGCCGCCTA TGCGTATCGT GCATACTTCG GATATGGAGT CCGGGCAGAT TTACATTCCG 
GCGATTAACT GGTTGCTGTA TGTGGCGGTG GTCATCGTCA TCGTCAGCTT TGAGCATTCC 
AGTAGTCTGG CCGCCGCTTA CGGGATTGCC GTGACCGGCA CCATGGTGCT TACCAGTATC 
CTGTCCTGTA CGGTGGCGGT GAAAAACTGG CACTGGTATC GCTATCTGGT CTGGTTGCTG 
TTGGTGGTGC TGTTGGCTAT CGATTTGCCG ATGTTCCTGG CCAACGTAGT GAAGATTATT 
TCTGGTGGTT GGTTGCCGCT GGCGCTGGGG ATGGTGATGT TCATCATCAT GACTACCTGG 
AAAAGTGAGC GTTTCCGGCT GTTGCGCCGT ATCCACGAGC ACGGTAATTC GCTGGATGCG 
ATGATCGTTT CGCTGGAGAA GAACCCTCCC GTTCGTGTGA CGGGAACGGC TGTTTATCTT 
TCGCGCGCTA CCCACGTCAT TCCGTTTGCT TTGTTGCACA ACCTTAAGCA CAACAAAGTG 
TTGCATGAGC GCGTCGTGTT GCTGACCATG AGGACCGAAG ACGCGCCTTA TGTGCATAAC 
GCCCGCCGTG TTTCGGTGGA GCAACTGTCT CCGACTTTCT GGCGTGTTGT CGCCAGCTAT 
GGCTGGCGCG AAACGCCGAA TGTCGAAGAG GTCTTCCATC GTTGCTGGCA GGATGGGCTG 
ACTTGCCAGA TGATGGAAAC GACGTTCTTC CTGTCGAATG AATCGTTGAT GATGGGCGCT 
CGCCCTTGGT ATCTGCGCAT TCGCGGTAAA CTGTTCATGA TGCTGAGCCG CAACGCGCTA 
CGTGCGGCAG ACCAGTTCGA AATTCCACCG AACCGGCTGA TCGAACTCGG GATTCAGGTC 
GAAATCTGA 

 

Protein sequence

MNSEHKRSLP AVTLAAIGVV YGDIGTSPLY TLRECLSGQF GFGVEPDSVF GFLSLIFWLL 
VLVVSLKYLS YVMRADNAGE GGILTLMSLA GRNTSDKVTA MVVIMGLIGG SFFYGEVVIT 
PAISVMSAIE GLDIVAPSLD TYIVPISIVV LTLLFMIQKH GTGRVGSLFA PIMMLWFLSL 
GVLGARSIIA NPEVLQALNP KWAINFFIQY KAVSFFALGA VVLSITGVEA LYADMGHFGK 
LPIRIAWFSA VLPSLVLNYF GQGALLLKNP EAIKNPFFLL APDWALIPLL VLATLATIIA 
SQAVISGVFS LTRQAVRLGY LPPMRIVHTS DMESGQIYIP AINWLLYVAV VIVIVSFEHS 
SSLAAAYGIA VTGTMVLTSI LSCTVAVKNW HWYRYLVWLL LVVLLAIDLP MFLANVVKII 
SGGWLPLALG MVMFIIMTTW KSERFRLLRR IHEHGNSLDA MIVSLEKNPP VRVTGTAVYL 
SRATHVIPFA LLHNLKHNKV LHERVVLLTM RTEDAPYVHN ARRVSVEQLS PTFWRVVASY 
GWRETPNVEE VFHRCWQDGL TCQMMETTFF LSNESLMMGA RPWYLRIRGK LFMMLSRNAL 
RAADQFEIPP NRLIELGIQV EI