| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4096 |
|---|
| Symbol | |
|---|
| ID | 8120948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4621190 |
|---|
| End bp | 4622092 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644854472 |
|---|
| Product | dipeptide transporter |
|---|
| Protein accession | YP_003006372 |
|---|
| Protein GI | 251791651 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCACG TTACCGAATC CGCAGCGACG GCTGCGCCGA AGCCCATGAC CCCGTTGCAG
GAGTTCTGGC ACTATTTCAA ACGTAATAAA GGGGCCGTCG TCGGCCTGGT TTACATCATT
CTGATGCTGG TGGTCGCGAT TGGCGCCAGC GTACTGGCGC CGCACGCACC GGCTGAACAG
TTCCGCGACG CGCTGCTTAA ACCGCCGGTT TGGCAGGACG GCGGCAGCTG GCAGTACATC
CTCGGCACCG ACGATGTGGG TCGCGACGTG CTGTCGCGCC TGATGTACGG CGCGCGCCTG
TCGCTGCTGG TAGGCTGTCT GGTGGTGGTG ATGTCGCTTG TCCTCGGCGT CGTTTTCGGG
CTGCTCGCCG GTTACTTTGG CGGTACGGTC GACGCCGCCA TTATGCGCCT GGTGGATATC
ATGCTGGCGT TGCCGAGCCT GCTGCTGGCG CTGGTGCTGG TGGCGATTTT CGGCCCGTCT
ATCGTCAATG CGTCGCTGGC GCTGACCTTC GTATCGCTGC CGCACTATGT ACGCCTTACC
CGCGCCGCGG TGCTGGTGGA AGTGAACCGC GACTATGTGA CCGCCTCGCG CGTGGCCGGT
GCCGGCCCGC TGCGCCAGAT GTTCGTCAAC ATTCTCCCTA ACTGCCTGGC GCCGTTGATC
GTGCAGGCAT CGATGGGTTT TTCCAACGCC ATTCTCGACA TGGCTGCACT TGGGTTCCTC
GGTATGGGCG CACAGCCGCC TACGCCAGAA TGGGGCACCA TGCTCTCCGA CGTGCTGCAA
TTTGCGCAGA GCGCCTGGTG GGTGGTGACG TTCCCCGGTT TGGCGATCCT GCTGGCGGTA
TTGGCATTTA ACCTGATGGG GGACGGCCTG CGTGATGCTC TCGACCCCAA ACTCAAGCAG
TAA
|
|---|
| Protein sequence | MTHVTESAAT AAPKPMTPLQ EFWHYFKRNK GAVVGLVYII LMLVVAIGAS VLAPHAPAEQ
FRDALLKPPV WQDGGSWQYI LGTDDVGRDV LSRLMYGARL SLLVGCLVVV MSLVLGVVFG
LLAGYFGGTV DAAIMRLVDI MLALPSLLLA LVLVAIFGPS IVNASLALTF VSLPHYVRLT
RAAVLVEVNR DYVTASRVAG AGPLRQMFVN ILPNCLAPLI VQASMGFSNA ILDMAALGFL
GMGAQPPTPE WGTMLSDVLQ FAQSAWWVVT FPGLAILLAV LAFNLMGDGL RDALDPKLKQ
|
|---|
| |