Gene Dd1591_4095 details

Gene Information

• Locus tag: Dd1591_4095
• Symbol: dppD
• ID: 8120947
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: -
• Start bp: 4620181
• End bp: 4621161
• Gene Length: 981 bp
• Protein Length: 326 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644854471
• Product: dipeptide transporter ATP-binding subunit
• Protein accession: YP_003006371
• Protein GI: 251791650
• COG category: [E] Amino acid transport and metabolism; [P] Inorganic ion transport and metabolism
• COG ID: [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
• TIGRFAM ID: [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGTTAC TCAACGTAGA GAAACTGTCC GTTCACTTTG GTGATGAGGG GTTGCCGTTT 
CGCGCAGTAG ACCGCATCAG CTATCAGGTG GAACAGGGGC AGGTGGTCGG CATCGTCGGC 
GAGTCCGGCT CCGGCAAATC CGTCAGTTCG CTGGCAATCA TGGGGTTGAT TGATTTCCCC 
GGTAAAGTGA TGGCCGACCG GCTGGAGTTC AACCAGCGCG ATTTGCAGAC GCTGTCCGAC 
AAGGAGCGGC GTCAACTGGT GGGGGCGGAA GTGGCGATGA TCTTCCAGGA CCCGATGACC 
AGCCTAAACC CTTGCTACAC TGTGGGTTTC CAGATTATGG AAGCCATCAA GGTGCATCAG 
GGCGGCAACC GTAAAACCCG CCGTCAGCGG GCGATTGACC TGTTGAATCA GGTCGGCATT 
CCCGACCCGG AATCGCGGCT GGATGTGTAT CCGCACCAAC TGTCGGGCGG GATGAGCCAG 
CGCGTGATGA TCGCGATGGC GATCGCCTGT CGGCCGAAAC TGTTGATCGC CGACGAGCCG 
ACGACGGCGC TGGATGTGAC TATTCAGGCG CAGATCATCG AACTGCTGCT GGAGTTGCAG 
CAGAAAGAGA ACATGGCGCT GATCCTGATT ACCCACGATC TGGCGCTGGT GGCGGAAGCG 
GCGCACCACA TCATCGTGAT GTATGCCGGG CAGGTGGTGG AATCCGGTAA AGCGGCGGAC 
ATTTTCCGCG CTCCGCGTCA CCCCTATACC CAGGCGCTGC TGCGCGCGCT GCCGGAATTC 
GCGGTGGACA AGTCCCGCCT GGCGTCGCTG CCGGGCGTGG TGCCGGGCAA GTACGACAGG 
CCGACCGGCT GTTTGCTCAA TCCGCGTTGC CCGTACGCCG GCGATCGTTG CCGTCAGGAA 
GAGCCTGAGA TGCGGGATAT CCCCGGTCGT CAGGTGAAAT GTCACACACC GCTGGATGAT 
GCGGGGAGGC CAACCGTATG A 

 

Protein sequence

MALLNVEKLS VHFGDEGLPF RAVDRISYQV EQGQVVGIVG ESGSGKSVSS LAIMGLIDFP 
GKVMADRLEF NQRDLQTLSD KERRQLVGAE VAMIFQDPMT SLNPCYTVGF QIMEAIKVHQ 
GGNRKTRRQR AIDLLNQVGI PDPESRLDVY PHQLSGGMSQ RVMIAMAIAC RPKLLIADEP 
TTALDVTIQA QIIELLLELQ QKENMALILI THDLALVAEA AHHIIVMYAG QVVESGKAAD 
IFRAPRHPYT QALLRALPEF AVDKSRLASL PGVVPGKYDR PTGCLLNPRC PYAGDRCRQE 
EPEMRDIPGR QVKCHTPLDD AGRPTV