| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3848 |
|---|
| Symbol | |
|---|
| ID | 8118801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4348225 |
|---|
| End bp | 4349277 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644854215 |
|---|
| Product | Alcohol dehydrogenase GroES domain protein |
|---|
| Protein accession | YP_003006127 |
|---|
| Protein GI | 251791406 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.12634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGA AAGTACTGGG GTATGCTGCA CAGTCGTCAG CCGCGCCATT AGCACCGTTC
CACTTTACCC GCCGCACGCC ACGCCCGGAC GATGTCGTGG TGGATATTCT CTATTGCGGT
GTTTGTCACT CCGACCTACA TCAGGCCCGT AATGACTGGG GATTTAGCCA TTATCCGTTG
GTTCCCGGCC ATGAAATTAT TGGGCGAGTT ACTGCCGTTG GCAATCAGGT CACCAAATTC
AAACCTGACG ATCTGGTGGG TATCGGTTGT ATGGTGGATT CGTGTCGTGA GTGCCAGCCG
TGCCAGCAGG GACTGGAGCA ATACTGTGAA GAAGGCAGCG TGCAGACCTA TAACGGGGTC
GATCGTCATG ATCACCAGCC GACTTATGGC GGCTATTCCC AGCAAATCGT CGTCTCACAG
GATTTCGTGC TGAGTATTCC CACATCGATG GATCTGAAAT CGGCGGCGCC GCTGTTGTGC
GCCGGGATTA CCACCTGGTC GCCGCTGCGT CACTGGAACG TCGGTAAAGG CAGCAAGGTG
GCGGTGGTCG GGCTGGGTGG TCTGGGCCAT ATGGCGATCA AGCTGGCTCA CGCGCTCGGT
GCGGAAGTGA CGCTATTCAC TCGTTCTCCC GGCAAAGAGG CCGACGCCCG GCGTTTAGGG
GCCGACCGTA TTGTGCTGTC GACTGAGGCG TCGCAGATGG CGACGGTCAA AGGGCAGTTC
GACTTGATCA TCGACACCGT GCCCTACGAG CATGACATCA ATCCTTACAT GCCGACGCTG
ACGGTAGACG GCACCTTAGT GTTTGTGGGG TTGTTGGGTG ATATCAACCC GATGCTCAAC
ACTGTTTCGA TGATTCTGGG GCGGCGGTCG GTCGCGGGTT CATGCATCGG CGGCATTGCT
GAAACGCAGG AAATGCTCGA TTTCTGCGGC GAGCATGGCA TCACTTCCGA CGTGGAAATG
ATCGATATTC AGAACATCAA CGTGGCCTAT GAACGTATGT TGAAAAGCGA CGTGAAATAC
CGGTTTGTTA TCGATATGGC ATCGCTGGCT TAA
|
|---|
| Protein sequence | MTMKVLGYAA QSSAAPLAPF HFTRRTPRPD DVVVDILYCG VCHSDLHQAR NDWGFSHYPL
VPGHEIIGRV TAVGNQVTKF KPDDLVGIGC MVDSCRECQP CQQGLEQYCE EGSVQTYNGV
DRHDHQPTYG GYSQQIVVSQ DFVLSIPTSM DLKSAAPLLC AGITTWSPLR HWNVGKGSKV
AVVGLGGLGH MAIKLAHALG AEVTLFTRSP GKEADARRLG ADRIVLSTEA SQMATVKGQF
DLIIDTVPYE HDINPYMPTL TVDGTLVFVG LLGDINPMLN TVSMILGRRS VAGSCIGGIA
ETQEMLDFCG EHGITSDVEM IDIQNINVAY ERMLKSDVKY RFVIDMASLA
|
|---|
| |