| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3421 |
|---|
| Symbol | |
|---|
| ID | 8119958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3889868 |
|---|
| End bp | 3890539 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644853792 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_003005712 |
|---|
| Protein GI | 251790991 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.394572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTGG TGATGTTGAG CGGTTTGCTG TTGTCATTGT CGCTGTGTCT GGATTTGGGC
ATCGTCAATA CCGCTATAAT TAATCGCGGT ATTCGGGATG GCGCAGGTGC CGCGTTTTTC
ATTGGTCTGG GATCCTGCTT CGGCGATTTG GTTTACGCCA CGCTGTCGGT GTTAGGAATG
GCGGTTATCT TCAACTATAC GCCGGTACGC TGGCTGTTGT GGATTGGCGG CGGCGGCGTA
CTGCTATGGT TGTCGTTCAA CATGGCACGC AGCGCCTGGC GAGACTACCG TCAGCATCGT
GGTTTGGCCA TCGACACTGC CGGCGAAGGT TCATTACAGG TATCAGCGCC GGCGAGCCGC
CATTTTATCA GTGGCATGGG AATGGCGTTG GCATCGCCCA GCGCATTGCT GTGGTTTGCT
GCCGTGGGCG GGACGTTGAT TGCTCAGGCG ACCGATGGGT CTGCCAGACA GATTGCGCTG
TTTCTCGGCG GATTTTTTAT CGGCGGTATA CTCTGGACGC TGTTTATGGC GGTCTTAATC
AAATACGGGC GTGGTGCGTT AAAAGGCCGA TTGTCGTTTT ACTGTAGTGC CGTCTCTGCT
GTGCTGTTTG CAGTATTTGC GGTTCAGGTC ATTACGAATG GATACCAAAC GTTGCTGGTG
CCAGCGGTGT GA
|
|---|
| Protein sequence | MLLVMLSGLL LSLSLCLDLG IVNTAIINRG IRDGAGAAFF IGLGSCFGDL VYATLSVLGM
AVIFNYTPVR WLLWIGGGGV LLWLSFNMAR SAWRDYRQHR GLAIDTAGEG SLQVSAPASR
HFISGMGMAL ASPSALLWFA AVGGTLIAQA TDGSARQIAL FLGGFFIGGI LWTLFMAVLI
KYGRGALKGR LSFYCSAVSA VLFAVFAVQV ITNGYQTLLV PAV
|
|---|
| |