| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3368 |
|---|
| Symbol | |
|---|
| ID | 8119904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3832651 |
|---|
| End bp | 3833544 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644853742 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003005663 |
|---|
| Protein GI | 251790942 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACATCCT CGATCCCAGA ACTGAATAAT GTGAATGTGA CTCACCGCAA GGCGCAAACC
GGTTCGCTGC TGGAGGTAGA CAATCTGCGG GTGAGTTTCG TCAATGGCCG TGCGGTGACC
GATGCCGTGC GCGGTGTGTC TTTCTCGCTG GGGTGTGAAA AGCTGGCGAT TGTGGGGGAA
TCCGGCTCCG GTAAATCCAC CGTTGGGCGC GCCTTATTGC AGTTGCATCC GCGTAGCGCC
CGCATTACTG CCGACCGCTT GAACTTCAAC GGTATCGACC TGCTGGCGGC GGACGAAGCG
CGGATGCGTC AGATCCGCGG TAAACGCATC TCCATGATCA TGCAGGATCC AAAGTATTCG
CTGAATCCGG TGGTGTGCGT CGGCGATCAG ATAGCCGAAG CCTATCTCGC TCACCACCGT
GTCTCATGGC AGGCGGCGAA GGAAAAGGTA CTGGCGATGC TGGATGTGGT GCGCATTCGC
CAGCCGGAGA GGGTGTATGG CTTGTATCCG CATGAGATCT CCGGCGGGCA GGGGCAGCGC
ATCATGATTG CCATGATGCT GATTACCGAA CCGGAAGTGG TGATTGCCGA CGAACCGACC
TCGGCGCTGG ATGTGTCCGT GCGCCTGCAG GTGCTGGCGA TGTTGGATGA TCTGGTCAGT
GAGCGGGGGT TGGGGCTGAT TTTTATCAGC CACGATATCA ATCTGGTGCG CAGCTTCTGC
GATCGGGTGC TGGTGATGTA CGCCGGCCGG GTAGTAGAGT CGATAGCGGC CGCTGATCTG
GAGCAGGCAC AACACCCTTA TACCCGCGGC TTGCTTAATG CCCTGCCGGA TATCGATAAT
CCTCGGCCAC GTTTACCGGT CATGAACCGT GATCCCGCCT GGCTCAACCC TTAA
|
|---|
| Protein sequence | MTSSIPELNN VNVTHRKAQT GSLLEVDNLR VSFVNGRAVT DAVRGVSFSL GCEKLAIVGE
SGSGKSTVGR ALLQLHPRSA RITADRLNFN GIDLLAADEA RMRQIRGKRI SMIMQDPKYS
LNPVVCVGDQ IAEAYLAHHR VSWQAAKEKV LAMLDVVRIR QPERVYGLYP HEISGGQGQR
IMIAMMLITE PEVVIADEPT SALDVSVRLQ VLAMLDDLVS ERGLGLIFIS HDINLVRSFC
DRVLVMYAGR VVESIAAADL EQAQHPYTRG LLNALPDIDN PRPRLPVMNR DPAWLNP
|
|---|
| |