Gene Dd1591_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3328 
Symbol 
ID8119064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3784909 
End bp3785691 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content45% 
IMG OID644853704 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003005625 
Protein GI251790904 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAGAA AATTATCTCT CCTGAAAATC ATCGTTATTT TTACTATTTC ACCGTTTGCA 
TTCGCCAAAC AGGATGTCAT TCGTATTGGC GTCGATTTGA CTTTCCCACC CTTTCAAATG
CGGGATGAAC ATGGCAACCC GGCAGGGTTT GATATCGATA TAACCGATGC GATTTGTAAA
TCAGTCAATG CAAAATGCGA CTATATCGTA AACACATTCG ATGCCCAGAT TCCGGCCCTG
CTCGCCAAAA AAATAGACGT TATTTCACCA CTTGGCGTCA CGAAAAAGAG AAAAGAATCG
ATAGGTTTCA GCGACTATGC TTTTCATCTA CCTACCCGAT TTGTTGCAAG GAAAGAAACG
AACCTGCTTC CCCAGGCCGA CATGCTGCGA GGGAAAAATA TAGCGGTACA ACAGGGCACT
ATTCAGGAAG CCTACGCCAA CAAACACTGG CTGCCTGCGG GGGTTAACGT TATAACCTAC
CCTGATCAGG AAGCGATTTA CGAAGATTTA TATGCCGGGA GGGTTGATGG CGCGCTGTGC
CCATCGGTTG CGCTGACATT CGGATTCCTG CAAACCCCGG AAGGTAAGGA TTTTGAGTTA
AAAGGCCCGG AAGTAACCGA TACGGATTTG TTCAGTATCG GCTCAGCATA CGGTATACGC
AAAGACGATA CGGACACAAA GGAGATGTTA AATCTGGGCT TGAAAAACAT AATGAACAAC
GGCGAATTTT CCCGTATCAA AAAACGGTAT TTCGGCGATA TTGATTTAAG CGTAAAAGAA
TAA
 
Protein sequence
MFRKLSLLKI IVIFTISPFA FAKQDVIRIG VDLTFPPFQM RDEHGNPAGF DIDITDAICK 
SVNAKCDYIV NTFDAQIPAL LAKKIDVISP LGVTKKRKES IGFSDYAFHL PTRFVARKET
NLLPQADMLR GKNIAVQQGT IQEAYANKHW LPAGVNVITY PDQEAIYEDL YAGRVDGALC
PSVALTFGFL QTPEGKDFEL KGPEVTDTDL FSIGSAYGIR KDDTDTKEML NLGLKNIMNN
GEFSRIKKRY FGDIDLSVKE