| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3152 |
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| Symbol | lpxB |
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| ID | 8121017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3593073 |
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| End bp | 3594224 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644853529 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_003005453 |
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| Protein GI | 251790732 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00776372 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCAGC GTCCCCTGAC TATCGGACTG GTCGCCGGAG AAACCTCCGG CGATATTCTT
GGTGCCGGCT TGATCCGCGC ACTGAAAGCT CACGTGCCTG ATGCCCGCTT TGTTGGTGTG
GCGGGTCCGC TTATGCAGGC TGAAGGTTGT GAAGCCTGGT ATGAGATGGA AGAGCTGGCG
GTGATGGGGG TGGTTGAAGT ACTGGAACGC CTGCCCCGCT TGTTGAAAAT CCGTCGTGAC
CTGACGCAGC GTTTCAGTGC ATTGCAACCC GATGTGTTTG TCGGTATCGA TGCTCCCGAC
TTTAACATTA CGCTGGAAGG TCGTCTCAAG CGCAATGGCA TCAAAACCAT CCACTATGTC
AGCCCGTCGG TGTGGGCATG GCGGCAAAAG CGCGTCTTCA AGATAGGTAA ATCCACACAT
CTGGTGCTGG CGTTTCTGCC GTTCGAAAAA GCCTTTTATG ATCGCTTCAA TGTGCCTTGT
CGTTTTATCG GCCATACCAT GGCGGATGCG ATGCCGCTGC ATCCGGACAA AGCCGCTGCA
CGACGTACGT TAGGGTTGCC GGAAGACGCG CGTTGCCTGG CGATGTTGCC GGGGAGTCGC
GGCGCCGAAG TAGAAATGTT GAGTGCGGAT TTTCTGAAAA CGGCGCAATT ACTGCGGCAA
ACCTACCCTG AACTGGAAGT GATCGTGCCG CTGGTAAATC AGCGACGCCG TGAACAGTTC
GAAAAAATTA AGGCTGAAGT CGCGCCGGAC ATGACCGTTC GGCTGCTGGA CGGGCAGGCG
CGTGATGCGA TGATCGCCAG CGACGCTGCC TTGCTGGCAT CCGGTACGGC GGCGCTGGAG
TGTATGCTGG CGAAGTGTCC GATGGTAGTC GGTTACCGCA TGAAGCCCTT TACCTATTGG
CTGGCGAAAC GACTGGTGAA AACGCCGTGG GTATCGTTGC CTAATTTACT GGCGGGGCGT
GAACTGGTCA GCGAGTTGTT GCAGGACGAT TGCACGCCCG ACAAACTATC GACGGCGTTA
TTACCTTGGC TGGCAGGCGG CGACGCGGCC CAGCAATTGC AGCAGACATT CTTACATTTG
CATGAGCAGA TTCGATGCGA CGCCGATGAG CAGGCGGCGC AGGCGGTACT GGAGCTGTGC
GGTTATGAGT GA
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| Protein sequence | MTQRPLTIGL VAGETSGDIL GAGLIRALKA HVPDARFVGV AGPLMQAEGC EAWYEMEELA
VMGVVEVLER LPRLLKIRRD LTQRFSALQP DVFVGIDAPD FNITLEGRLK RNGIKTIHYV
SPSVWAWRQK RVFKIGKSTH LVLAFLPFEK AFYDRFNVPC RFIGHTMADA MPLHPDKAAA
RRTLGLPEDA RCLAMLPGSR GAEVEMLSAD FLKTAQLLRQ TYPELEVIVP LVNQRRREQF
EKIKAEVAPD MTVRLLDGQA RDAMIASDAA LLASGTAALE CMLAKCPMVV GYRMKPFTYW
LAKRLVKTPW VSLPNLLAGR ELVSELLQDD CTPDKLSTAL LPWLAGGDAA QQLQQTFLHL
HEQIRCDADE QAAQAVLELC GYE
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