Gene Dd1591_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3128 
Symbol 
ID8117826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3566603 
End bp3567328 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content58% 
IMG OID644853505 
Productdiguanylate cyclase 
Protein accessionYP_003005429 
Protein GI251790708 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGCT ATGAACTGTT CACCCCCGAA TACGACATCC TGCTGTCAGC CCGCAATATT 
GCCGCTCAGG CCGACATGCC GGCGGAGGTG TACCGGGAAA GCCTGATTAT GCTGGCGGAA
CACTATCAAC GACTGGTACG GGAAACCCAC CGGCTGATCA CCCGTAGCGA CAGGGCGGAA
CGTGAGCTGA CCCGCCTCAA TACCCAATTA CATCAGTTAG CGGTGGAACT GGAGTACAAA
GCCACCCACG ACCCGCTGAC CGATGTATTC AACCGCAGCG CGATCATCGA CCTGGTCGAC
CACGCGCTGG AACAGGAGCA GGCGGCACTG ATAGTGCTGG ATATCGACCA TTTCAAACAG
GTCAACGACG CTTACGGTCA CCCAACCGGT GATGCGGTGA TCTGTGCGTT GATAGCCCGT
ATCAGAGAGC TGCTACAGGG AAAAGGCAGT ATTGGCCGCG TCGGCGGCGA AGAATTTACC
ATCCTGCTGG ATGGCTATAC GTTGATGGCC GCGGTGGATA TCGCCGAGCA TATCCACGCC
AGCCTGAACC ACACCGCACT GGAGCCGTTG CCTGAGTATC AGGTTACCGC CAGCTTCGGC
GTCAGTTGGG CGCCGCCGCA TACCAGTTTC GATATGTTGT ACGGCACCGC CGACGCCGCG
TTATACCGGG CCAAGCATCA GGGGCGCAAC CGGGTGGAAT ATATACCGAT AGATACCGTC
AGCTAA
 
Protein sequence
MSRYELFTPE YDILLSARNI AAQADMPAEV YRESLIMLAE HYQRLVRETH RLITRSDRAE 
RELTRLNTQL HQLAVELEYK ATHDPLTDVF NRSAIIDLVD HALEQEQAAL IVLDIDHFKQ
VNDAYGHPTG DAVICALIAR IRELLQGKGS IGRVGGEEFT ILLDGYTLMA AVDIAEHIHA
SLNHTALEPL PEYQVTASFG VSWAPPHTSF DMLYGTADAA LYRAKHQGRN RVEYIPIDTV
S