Gene Dd1591_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2998 
Symbol 
ID8116975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3409397 
End bp3410218 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content57% 
IMG OID644853375 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003005299 
Protein GI251790578 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TTCTCGCACT GACGGCGCTC GCCCTGAGCG CCTGTTTTAT GCTCAGCGCC 
GCGCAGGCCG GCAGCACGCT GGAGCGGGTT AAGCAAACCG GTGTCGTTCG CAACGTTCTG
TTCAATGACT ACCCGCCATT CAGTTATCTG GACGATAAAA ATCAGTTGGT CGGTTTCGAC
GTCGACGTCG CCAACGCCGT TGCGAAGAAA CTGGGAACCA GGCTGGAACT GGCAACCCCC
GGCTGGGAAA CCATTGTCGG CGGGAAATGG CAAGGCCGTT GGGACATGTG CATCTGCTCG
ATGACCCCCA ATGCGGAGCG CGCCAAAGTA CTCGATTTCA GCACGCCCTA TTACAGCACT
TTTGCCGTCC TGATCGTCCA TAAGGATGAG AAGAACATCC AATCCGCCGC CGACCTGAGC
AACAAGAAAG TCGGGTTGGG GCTAGGGTCC AGCTATGAGA ATTACCTCAA TAAAAGTCTG
GCGATCCCCG GCGGTAAGCC GATCGACTTC CCGTTTAACC ACGTGCAGGC GGTGCCCACC
GACGAAGACA TGGCGTTCCG TAATCTGGCG CTCGGCCCGG GTAAACGGCT GGATGCGGTA
ATTTCCGATC GCATCACCGC CAAACCGCGT ATCGAGAAGC TGCCGCAGTT GCGTATTTTG
CAGCAACTGT ATGCCGAACC GAACTGGATT GCCGTCGACA AAGGCGACCC GGAATGGAGC
AAAACGCTGG CCGACGCCAT CTCCGCGCTG CGCGCCGACG GCACGCTGAA AGCTATCTCG
ATGAAATGGT TTGGTGAAGA CATCACCGGG GTCACCCCGT AA
 
Protein sequence
MKKLLALTAL ALSACFMLSA AQAGSTLERV KQTGVVRNVL FNDYPPFSYL DDKNQLVGFD 
VDVANAVAKK LGTRLELATP GWETIVGGKW QGRWDMCICS MTPNAERAKV LDFSTPYYST
FAVLIVHKDE KNIQSAADLS NKKVGLGLGS SYENYLNKSL AIPGGKPIDF PFNHVQAVPT
DEDMAFRNLA LGPGKRLDAV ISDRITAKPR IEKLPQLRIL QQLYAEPNWI AVDKGDPEWS
KTLADAISAL RADGTLKAIS MKWFGEDITG VTP