| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2914 |
|---|
| Symbol | sucA |
|---|
| ID | 8118325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3317259 |
|---|
| End bp | 3320066 |
|---|
| Gene Length | 2808 bp |
|---|
| Protein Length | 935 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644853285 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_003005215 |
|---|
| Protein GI | 251790494 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACG GCGCAATGAA GGCCTGGCTG GATTCCTCCT ATCTGGCGGG CGCGAACCAG
TCCTACATAG AGCAGCTCTA TGAAGATTTT TTAACCGACC CGGACTCTGT CGATCACAGC
TGGCGTTCGA TTTTTCAACA ACTTCCTACC ACTGGGGTTA AACCGGATCA ACTTCACTCC
AAAACCCGCG ATTATTTTCG TCGTCTGGCG AAAGATGCAT CGCGTTACAC TTCTTCCATT
ACTGATCCTG ACAGTGATGC TAAGCAAGTC AAAGTATTGC AGCTGATTAA CGCATTCCGT
TTCCGTGGGC ATCAGCACGC CAATCTTGAT CCGTTGGGGT TGTGGAAGCA GGATCGTGTA
GCGGATCTTG ACCTGGCTTA CCACAATCTG ACGGACGATG ATCTGAAAGA GACCTTTAAC
GTCGGCTCGT TTGCCATCGG TAGCGAAACG ATGCCGCTCG GCGAGCTGTA TGCTGCGCTT
AAGCAGACTT ACTGTGGTTC GATCGGTGCG GAATACATGC ACATCACCAA TACTGAGGAA
AAACGCTGGA TTCAGCAGCG TATTGAATCA GTGGTGGGGC AGCCGAGTTT TACCGTTGAA
GAAAGAAAAC GTTTCCTGAA AGAACTGACC GCTGCCGAAG GGCTGGAGCG CTATCTGGGC
GCCAAGTTCC CCGGCGCCAA GCGCTTCTCG CTGGAAGGCG GCGATGCGTT GATCCCGATG
TTGAAGGAAA TTATCCGTCA CGCGGGTAAG AATGGTACGC GTGAAGTGGT CGTAGGGATG
GCCCACCGTG GGCGTCTCAA CGTGCTGGTA AACGTGATGG GGAAAAAACC CCAGGACTTG
TTCGACGAGT TTTCCGGTAA GCACAAAGAC CACCTTGGCA CCGGTGACGT GAAGTACCAT
CAGGGCTTCT CATCCGATAT GGAAACTGAA GGCGGCAAAG TCCATTTGGC GTTGGCGTTC
AACCCCTCGC ATCTGGAAAT TGTCAGCCCG GTCGTGATCG GGTCGGTGCG GGCTCGTATC
GATCGTCTGG ATAATCCCAG CAGTTCTCTG GTATTGCCGA TTACGATTCA TGGCGATGCG
GCGATTACCG GTCAGGGTGT GGTGCAAGAA ACGCTGAACA TGTCCAAGGC ACGTGGATAT
GAAGTCGGCG GCACTATTCG CATCGTCATC AATAACCAGG TTGGTTTTAC CACTTCCAAC
CCTCGCGATG CACGCTCCAC CGAATATTGT ACTGACATTG GTAAGATGGT GCAGGCACCG
ATCTTCCACG TCAATGCTGA CGACCCGGAA GCGGTAGCGT TTGTTACCCG TCTGGCGTTG
GATTTCCGCA ACACCTTCCA GCGTGATGTC TTCATCGATC TGGTGTGCTA CCGCCGTCAT
GGCCATAACG AAGCCGACGA ACCGAGCGCT ACCCAGCCGG TGATGTACCA GAAAATCAAA
AAGCATCCGA CTCCTCGCAA AATTTATGCC GATCGTCTGG AACAGCAAAA AGTGGCGACG
CTGGAAGACG CTACCGAGCT GGTTAATCTT TATCGCGATG CGCTGGATGC CGGCGAATGC
GTGGTAGATG AGTGGCGTCC GATGGATATG CATTCTTTCA CCTGGATGTC TTATCTCAAC
CATGAGTGGG ACGAGCCTTA TCCGCATAAA GTTGAAACCA AGCGTTTACA GGAGCTGGCG
CGACGTATCA GCGAAGTGCC GGAAGCGCTG GAAATGCAAC CACGCGTCGC CAAGATTTAT
AACGACCGTG CTGAAATGGC GGCGGGAGAA AAGGCGTTTG ACTGGGGCGG AGCGGAAACA
TTGGCATACG CTACGCTGGT GGATGAAGGC ATCCCGGTTC GTTTATCCGG TGAAGATGCC
GGGCGCGGCA CCTTCTTCCA TCGTCATGCC GTGGTGCATA ACCAGAAGGG CGGTTCCACC
TATACGCCGT TGACGCACGT TCATAATGCT CAGGGCGTCT TCAATGTCTG GGACTCGGTG
CTGTCTGAAG AAGCCGTGCT GGCGTTTGAA TACGGTTATG CGACTGCCGA GCCGCGTACG
CTCACCATTT GGGAAGCGCA GTTTGGTGAC TTCGCTAACG GCGCGCAGGT GGTGATTGAC
CAGTTCATTA GCTCCGGCGA GCAGAAGTGG GGCCGTATGT GCGGGCTGGT CATGTTGCTG
CCGCACGGTT ACGAAGGTCA GGGACCGGAG CACTCCTCCG CACGTCTTGA GCGCTATTTG
CAATTGTGCG CGGAACAGAA TATGCAGGTT TGCGTTCCGT CGACACCGGC ACAGGTTTAC
CACATGTTGC GCCGCCAGGC GTTGCGCGGT ATGCGTCGCC CGTTAGTAGT CATGTCGCCG
AAATCGTTGC TGCGTCATCC GCTGGCGACG TCTACGCTGG ATGAGCTGGC GAATGGGCAG
TTCCAACCGG CGATAGGGGA AATCGACCAA CTGGATCCCA AAGCAGTGAA GCGCGTCGTG
CTGTGCTCCG GCAAGGTCTA CTATGATTTA CTGGAGCAGC GTCGTAAGAA TGAACAGAAC
GATGTGGCGA TAGTACGTAT CGAACAGCTA TATCCGTTCC CGCATCAGGC GGTACAGGCT
GCGCTGGAGC CGTTCGCTCA CGTACATGAT TTTGTCTGGT GCCAGGAAGA GCCGCTGAAC
CAAGGCGCAT GGTATTGCAG TCAGCACCAC TTCCGTGAGG TGATTCCTTT TGGCGCATCG
TTGCGGTACG CCGGTCGCCC GGCCTCTGCC TCACCCGCCG TTGGCTATAT GTCCGTACAC
CAGAAACAAC AACAAGCTCT GGTTGATGAC GCGCTGAACG TTAATTAA
|
|---|
| Protein sequence | MQNGAMKAWL DSSYLAGANQ SYIEQLYEDF LTDPDSVDHS WRSIFQQLPT TGVKPDQLHS
KTRDYFRRLA KDASRYTSSI TDPDSDAKQV KVLQLINAFR FRGHQHANLD PLGLWKQDRV
ADLDLAYHNL TDDDLKETFN VGSFAIGSET MPLGELYAAL KQTYCGSIGA EYMHITNTEE
KRWIQQRIES VVGQPSFTVE ERKRFLKELT AAEGLERYLG AKFPGAKRFS LEGGDALIPM
LKEIIRHAGK NGTREVVVGM AHRGRLNVLV NVMGKKPQDL FDEFSGKHKD HLGTGDVKYH
QGFSSDMETE GGKVHLALAF NPSHLEIVSP VVIGSVRARI DRLDNPSSSL VLPITIHGDA
AITGQGVVQE TLNMSKARGY EVGGTIRIVI NNQVGFTTSN PRDARSTEYC TDIGKMVQAP
IFHVNADDPE AVAFVTRLAL DFRNTFQRDV FIDLVCYRRH GHNEADEPSA TQPVMYQKIK
KHPTPRKIYA DRLEQQKVAT LEDATELVNL YRDALDAGEC VVDEWRPMDM HSFTWMSYLN
HEWDEPYPHK VETKRLQELA RRISEVPEAL EMQPRVAKIY NDRAEMAAGE KAFDWGGAET
LAYATLVDEG IPVRLSGEDA GRGTFFHRHA VVHNQKGGST YTPLTHVHNA QGVFNVWDSV
LSEEAVLAFE YGYATAEPRT LTIWEAQFGD FANGAQVVID QFISSGEQKW GRMCGLVMLL
PHGYEGQGPE HSSARLERYL QLCAEQNMQV CVPSTPAQVY HMLRRQALRG MRRPLVVMSP
KSLLRHPLAT STLDELANGQ FQPAIGEIDQ LDPKAVKRVV LCSGKVYYDL LEQRRKNEQN
DVAIVRIEQL YPFPHQAVQA ALEPFAHVHD FVWCQEEPLN QGAWYCSQHH FREVIPFGAS
LRYAGRPASA SPAVGYMSVH QKQQQALVDD ALNVN
|
|---|
| |