| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2886 |
|---|
| Symbol | |
|---|
| ID | 8120582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3287042 |
|---|
| End bp | 3288058 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644853255 |
|---|
| Product | UDP-galactose-4-epimerase |
|---|
| Protein accession | YP_003005187 |
|---|
| Protein GI | 251790466 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.632321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAT TGGTTACAGG TGGTAGCGGT TACATAGGAA GTCATACCTG TGTGCAACTG
ATCGCCGCCG GTCATCAGCC GGTTATTCTC GACAACCTGT GCAACAGTAA AGCCAGCGTA
GTAAAAGCCA TTGCCCACGT CAGCGGGCAG ACGCCGGTGT TTTATCAGGG CGATATCCGC
GACGGCAGCC TGTTGCAGAC GATTTTTGCC GAGCACGATA TCGGTGCCGT GATCCACTTC
GCCGGCCTGA AAGCGGTGGG CGAATCGGTA CGCGAACCCA TCAGTTATTA CGATAACAAT
GTCTACGGCA CGCTGACGCT GGTGGAAGCC ATGAAACACG CCGGCGTTAA GACACTGATT
TTCAGCTCTT CCGCCACCGT CTACGGCGAC CAGCCGCAAA TCCCGTACCA GGAAAGCTTC
CCCACCGGCA CCCCCGCCAG CCCGTATGGC CGCAGCAAAC TGATGGTAGA GCAGATCCTG
CAGGATTTGC AGCGCGCGGA GCCGGACTGG AGCGTGGTGC TACTGCGCTA CTTTAACCCG
GTGGGCGCGC ACCCGTCGGG TGAGATGGGC GAAGACCCGC AGGGCGTGCC CAACAACCTG
ATGCCTTACA TTGCGCAGGT GGCGGTAGGC CGCCGCGACT CGCTGGCGAT TTTCGGTAAT
GATTACCCGA CCGTCGACGG CACCGGCGTG CGAGACTACA TCCACGTGGT GGATTTGGCC
GATGGTCATG TCGCCGCCAT GAATACTCTG CACGGCAAAC CCGGCGTACA CACCTACAAC
CTCGGCGCCG GCGTCGGCTA CAGCGTGCTG CAAGTGGTGG AAGCCTTCAG CCGCGCCTGC
GGCAAGCCGC TGCCGTATCA TTTTGCGCCC CGCCGCGACG GCGACCTGCC CGCTTACTGG
GCCGACGCGG AAAAAGCCGC TCGCGAACTT AACTGGCGCG TCAGCCGAAC GCTGGATGAG
ATGGCCGCCG ATACCTGGCG CTGGCAATCC CGCCATCCGA ATGGCTTTTC AGACTGA
|
|---|
| Protein sequence | MKVLVTGGSG YIGSHTCVQL IAAGHQPVIL DNLCNSKASV VKAIAHVSGQ TPVFYQGDIR
DGSLLQTIFA EHDIGAVIHF AGLKAVGESV REPISYYDNN VYGTLTLVEA MKHAGVKTLI
FSSSATVYGD QPQIPYQESF PTGTPASPYG RSKLMVEQIL QDLQRAEPDW SVVLLRYFNP
VGAHPSGEMG EDPQGVPNNL MPYIAQVAVG RRDSLAIFGN DYPTVDGTGV RDYIHVVDLA
DGHVAAMNTL HGKPGVHTYN LGAGVGYSVL QVVEAFSRAC GKPLPYHFAP RRDGDLPAYW
ADAEKAAREL NWRVSRTLDE MAADTWRWQS RHPNGFSD
|
|---|
| |