| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2771 |
|---|
| Symbol | |
|---|
| ID | 8119774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3143275 |
|---|
| End bp | 3145011 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644853142 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003005074 |
|---|
| Protein GI | 251790353 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.512603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTT TACTGACTGT ACACGCCCTG AGCGTGGATA CCCCTTTCGG CCCTCTGCTG
AACGACATTT CTTTTACCCT GAACCAGGGC GACCGCCTCG GTTTGATCGG CCATAACGGT
TGCGGCAAAA GTACGCTGTT AAAACTACTG GATGGCACGT TAGCGCCAGG GCGCGGCAGT
GTGACGCTTT CCCATCATTG CCTGCTGGCT CGTGTTGAAC AGCATCTGCC GGCGGATCTG
CATCCGTTGA CGATGCTGGA TGCGGTGCTG GCTCGTCTTC CCGCGGCCGA ACGCGCCGGC
GAGCGCTGGC GGGCGGAAAC CTTGCTGGCG GAAATGGGAT TCGGCGAGCG GGACTGGCGG
CTGTGCGCCG GTACTCTCAG TGGCGGCCAG CATACCCGGT TATTGCTGGC GCGAGCCCTG
ATCACCTCGC CGGATCTGCT GTTGCTGGAT GAGCCGAGTA ACCATCTGGA CTTGCCGACG
TTGCTGTGGC TGGAGCAGTT CCTGCAACAC TGGAGCGGCA GCTTTGTGCT GGTTTCCCAC
GATAGCCAGT TGCTGGATAA CGTCACCAAC GGCAGCTATA TCCTGCGTGA CCGGCAACTG
CATTATTTTG CGCTGCCCTG TAGCGCCGCC CGCGCGGCAC TGGCGGAGCG CGATCGCAGC
GATGCGTTGC GCCGCAAAGC GGAACAGAAG GAAATCGACC GCGTGACCGT TAGCGCCAAA
CGGCTGGCCA TCTGGGGCAA GGTCTACGAT AACGAAGATC TGGCGCGCAA GGCCAAACAG
ATGGAAAAAC GCATCGAGCG GCTCAAAGAG GAGCAAACCG AGCTGACCGC CGGCAACCAG
TGGCGGCTGG CGCTGCATGG CGAAGCGCTG AACGCCGATC GTCTGCTGGA GATGACGGCG
CTGGCCGTTA GCCCGGCACC GCAGCAGCCA ACGCTGCTCA CCGTGCCGTT ACAGCGGGTG
AAAAGCGGTG ATCGGGTGGC GATTATCGGC CGAAACGGCA GCGGCAAGTC TTCGTTGTTG
CGTCTTCTAT GGCAGCAGTA CCCGAATTCG ACGCCGGATG GGGCGATTCG TCTGCATCCC
CGCGTTCGGT TGGGGTATTA CGACCAGACG CTGCATCAAC TGCGTGACGA CGACACCCTG
TTTGATGCGC TGGCTCCGTT CGCGCCGCTG GCGCAAGACC GCAAGATGGC GTTGATCAGC
GCCGGGTTTC CGTGGTCGCG TCATCAGCAA ACCGTTGCCA CTCTGAGCGG CGGCGAACGC
GCCCGGCTAC TGTTCGTCGG GCTGTCGCTG GCGCGTTACG GGCTGCTGAT GCTGGACGAG
CCGACCAACC ATCTGGATAT GGAAGGCAAA GAGGCGCTGG CCGATACGCT GCAATGCTTT
GATGGCGGCG TGCTGTTGGT GACGCACGAC CGGGCGTTGA TCAGCCACAG TTGCAATCGC
TTCTGGCTGG TTGAGCACGG CATGTTGAGC GAGTGGCACG ACCTGGATCA GGTCTATCAG
CGTCTGGGGA CCGCATCTGC CGACACCGCA ATGCATTCGG CACCGCCGTC AGCAACGGTA
TCGCCGGTGA CATTGGAACA GGGGGATGAA GCCGACAGGC TGCTGGCGCA ACTGGTTGAG
CTGGAAAACC GGCTGACCGA GGATCTGGCG CGGAAGGCGA AGCACCAGAA ACCGGCGCTA
CAGGCGCAGT GGCGGCAAGA AATCGCCCGC CTCAACGCCT TGTTGGGATT GGTGTAA
|
|---|
| Protein sequence | MSTLLTVHAL SVDTPFGPLL NDISFTLNQG DRLGLIGHNG CGKSTLLKLL DGTLAPGRGS
VTLSHHCLLA RVEQHLPADL HPLTMLDAVL ARLPAAERAG ERWRAETLLA EMGFGERDWR
LCAGTLSGGQ HTRLLLARAL ITSPDLLLLD EPSNHLDLPT LLWLEQFLQH WSGSFVLVSH
DSQLLDNVTN GSYILRDRQL HYFALPCSAA RAALAERDRS DALRRKAEQK EIDRVTVSAK
RLAIWGKVYD NEDLARKAKQ MEKRIERLKE EQTELTAGNQ WRLALHGEAL NADRLLEMTA
LAVSPAPQQP TLLTVPLQRV KSGDRVAIIG RNGSGKSSLL RLLWQQYPNS TPDGAIRLHP
RVRLGYYDQT LHQLRDDDTL FDALAPFAPL AQDRKMALIS AGFPWSRHQQ TVATLSGGER
ARLLFVGLSL ARYGLLMLDE PTNHLDMEGK EALADTLQCF DGGVLLVTHD RALISHSCNR
FWLVEHGMLS EWHDLDQVYQ RLGTASADTA MHSAPPSATV SPVTLEQGDE ADRLLAQLVE
LENRLTEDLA RKAKHQKPAL QAQWRQEIAR LNALLGLV
|
|---|
| |