| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2688 |
|---|
| Symbol | |
|---|
| ID | 8119130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3052090 |
|---|
| End bp | 3053259 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644853062 |
|---|
| Product | phosphonate metabolism protein PhnM |
|---|
| Protein accession | YP_003004995 |
|---|
| Protein GI | 251790274 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
|---|
| TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG CTACTCAGAT CACCAATACT ACCCGGATCA TCAATAATGT GCAGTTGGTG
TTGCAGGATG AAGTGGTCAG CGGGTCGCTG GCCTGGCGAG ACGGCGTGAT CGAGGCGTTT
TCTTCCACCC CCAGCCAACT GCCGCAGGCG CTGGACGGCG AGGGCGGCTG GCTGTTGCCG
GGGCTGGTGG AACTGCACAC CGACAATCTG GACAAGTTTT TTATGCCGCG CCCGAAAGTC
GACTGGCCGG CCCATTCGGC GATGAGCAGC CACGATGCGC TGATTGTCTC CAGCGGTATC
ACCACGGTGT TGGATGCGGT GGCGATAGGC GATGTGCGCG ACGGCGGCCA CCGGCTCGAT
AACCTGCGGC GCATGATTGA CGCCGTAGTG CATAGCCAGC AGCAAGGGGT GAACCGGGCG
CAGCATCTGC TGCACCTGCG ATGCGAATTA CCGCACGACA GCACCCTGCC GTTATTTGAA
GCGTTGATGG ATATTCCGGA AGTGGCGTTG GTGTCGCTGA TGGACCACTC GCCGGGGCAG
CGGCAGTTCG CCACGCCGGA AAAATACCGC GAGTATTATC AGGGCAAATA CCACCTGAAC
GATGCGGAGA TGGACGCGTT TGAAACCGAA CAGCGCATGT TGTCTGAACG TTGGTCGACG
CCGAACCGGC TGGTGATTGC CGCTCACTGC CGTGAACGCG GCATCGCGCT GGCCAGCCAC
GACGATGCCA CCGCCGCCCA TGTGCAGGAA TCGCTGGCGC AAGGGTGCGT GATCGCCGAA
TTTCCCACCA CCGAGAGGGC GGCGCAGGCG TCGCACGCCA GCGGCATGAA AGTGCTGATG
GGCGCACCCA ATATCGTGCG CGGCGGCTCC CACTCCGGCA ACGTGGCGGC GTCTTATCTG
GCGGAGCATG GCCTGCTGGA TATTCTGTCG TCCGATTATT ATCCCGCCAG TTTGCTGGAT
GCGGCGTTTC GTCTTGCCGC CGACCAGCGT AACGAGTTTA CCCTGCCGCA GACGGTGGCG
ATGGTCAGCG ATAATCCGGC GCAGGCGGTC GGGTTAAGCG ATCGCGGGCG GATTGCCGCT
GGGCGACGCG CTGATCTGGT GCTGGCGCAT CACACTCACG ACCAGGTGCG GATTCGGCAT
GTCTGGGCGC AGGGGCGGCA GGTGTTCTGA
|
|---|
| Protein sequence | MSAATQITNT TRIINNVQLV LQDEVVSGSL AWRDGVIEAF SSTPSQLPQA LDGEGGWLLP
GLVELHTDNL DKFFMPRPKV DWPAHSAMSS HDALIVSSGI TTVLDAVAIG DVRDGGHRLD
NLRRMIDAVV HSQQQGVNRA QHLLHLRCEL PHDSTLPLFE ALMDIPEVAL VSLMDHSPGQ
RQFATPEKYR EYYQGKYHLN DAEMDAFETE QRMLSERWST PNRLVIAAHC RERGIALASH
DDATAAHVQE SLAQGCVIAE FPTTERAAQA SHASGMKVLM GAPNIVRGGS HSGNVAASYL
AEHGLLDILS SDYYPASLLD AAFRLAADQR NEFTLPQTVA MVSDNPAQAV GLSDRGRIAA
GRRADLVLAH HTHDQVRIRH VWAQGRQVF
|
|---|
| |