| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2462 |
|---|
| Symbol | |
|---|
| ID | 8120103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2813715 |
|---|
| End bp | 2814998 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644852846 |
|---|
| Product | arsenical pump membrane protein |
|---|
| Protein accession | YP_003004781 |
|---|
| Protein GI | 251790060 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.406949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTGG CTGCAGCCGT TTTTATACTG ACGTTAATTC TGGTCATTTG GCAGCCGCGG
GGGTTGGGGA TCGGCTGGAG CGCATCGCTT GGGGCGGTGC TGGCCTGGGC GACCGGGGTG
ATTCAGTTGG AAGATATTCC CGTGGTGTGG CACATCGTTT GGAACGCGAC GACGACGTTC
ATTGCGGTGA TTATTATCAG CTTACTGCTC GATAAGTCGG GCTTTTTTGA GTGGGCGGCG
CTGCATATGG CGCGCAAAGG ACAGGGCCGC GGCAAACGAC TGTTCACGCT GATGATTGTG
CTGGGGGCAT TGGTCGCTGC GCTGTTTGCG AATGATGGCG CCGCACTGAT CCTGACGCCA
ATAGTCGTGG CGATGCTGAC CGCGCTGGGT TTTAGCCGCG GTGCAACGCT GGCCTTTGTG
ATGGCCGCTG GATTTATTGC AGATACCTCC AGTCTGCCGC TGGTCGTCTC TAATCTGGTT
AATATCGTCA CGGCGGATTA CTTTCGTATC GATTTCAATA CCTATGCGTG GGTGATGATT
CCGGTGGATA TCGCCGCTGT CGTTGCTACG TTGGTTGTGC TGCATCTGTT TTTTCGTCGG
GAGATTCCAA CCGATTATGA TTTGGACAAG CTGAAAGATC CCGCGGCGGC AATTCGCGAC
AGGCAGACGT TTAACGCCGG ATGGTTTGTA CTGGCACTGT TGTTAGGCGG TTTTTTCGTG
CTGGAGCCGC TGGGCGTTCC CGTCAGCCTG GTCGCAACGG TGGCCGCCGT GATCCTCTGG
CTGGTTGCCC GGCGAGGGGC CATCATTGAT ACCGGCACGG TATTGCGTGG TGCGCCCTGG
CAGATTGTGG TGTTTTCACT GGGCATGTAT CTGGTGGTGT ATGGTCTGCG TAATGCCGGA
CTGACAGATT CTCTGACACG TGTGTTGAAT GATTTTGCCG CTCAGGGGCT ATGGGTGGCG
ACCATAGGCA CCGGTTTCCT CACGGCAGTG TTGTCATCGG TGATGAACAA TATGCCGACG
GTGCTTATCG GCGCATTGTC GATTGATGCT TCTGCGGCTG ATGGCCTCAT TCGTGAGGCA
ATGATTTACG CCAACATTAT CGGCTGTGAT TTAGGCCCCA AATTGACCCC TATCGGCAGC
CTTGCCACGC TGCTGTGGTT GCACGTGCTG GCGCAAAAAG AGATTCGCAT CAGTTGGGGA
TATTATTTCC GCGTGGGCGT GGTGATGACG TTACCGGTGC TGTTCGTAAC GCTGGCAGCG
CTGGCGCTGC GTCTTTCTAT CTAA
|
|---|
| Protein sequence | MLLAAAVFIL TLILVIWQPR GLGIGWSASL GAVLAWATGV IQLEDIPVVW HIVWNATTTF
IAVIIISLLL DKSGFFEWAA LHMARKGQGR GKRLFTLMIV LGALVAALFA NDGAALILTP
IVVAMLTALG FSRGATLAFV MAAGFIADTS SLPLVVSNLV NIVTADYFRI DFNTYAWVMI
PVDIAAVVAT LVVLHLFFRR EIPTDYDLDK LKDPAAAIRD RQTFNAGWFV LALLLGGFFV
LEPLGVPVSL VATVAAVILW LVARRGAIID TGTVLRGAPW QIVVFSLGMY LVVYGLRNAG
LTDSLTRVLN DFAAQGLWVA TIGTGFLTAV LSSVMNNMPT VLIGALSIDA SAADGLIREA
MIYANIIGCD LGPKLTPIGS LATLLWLHVL AQKEIRISWG YYFRVGVVMT LPVLFVTLAA
LALRLSI
|
|---|
| |