Gene Dd1591_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2226 
Symbol 
ID8119224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand+ 
Start bp2557326 
End bp2558015 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content47% 
IMG OID644852611 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_003004548 
Protein GI251789827 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAG CTTCGATGAC CCGCTTTTTA TTGGTATTAA TACTGATAAT AGCCAGCTCA 
CCGGGAATAG CCGGTCGTTC GCTATGTCCT GGAAATTTTA TTCATGATGA AACACCGGAT 
ATTCATTATG ATGAAGAAAT CTGTTTTACA GCTTTTGCTG TCCTGTATAG CTATGCGAAT 
AAAGGCCCCG TTATTTCTGC TGAGCATTTA ACGGCGGAGA GGGTCAAAGC GGCAGAAAAA 
CTTCCCCGGC GGAATGCCTT TCATCGTGAG CACCAAATCC CCACAGCAGC ACAATCATCA 
AGTAGTGATT ATGAATATTC CGGGTACGAC CAAGGTCATA TGACGCCGGC TGGAGATATG 
CCTGACGCTC AAACCCAGCA TGAGTCATTT TCAATGTCGA ATATGACACC GCAATTACCG 
CAACTGAACC GACTATCCTG GCGTAAAACA GAAGAATATG TTCGCAAACT GGCGTTACAG 
GATGGTGAAG TCTGGGTAAT TACCGGAGCT CTGTACGGCA AAGAGCGTAT TGGTAACGGT 
GTATCCGTCC CAACGCTGAT TTATAAAGCC GTCAGCAGCC AATCCGGCCA ACAGGTTTTT 
GTCGGCGACA ATACCTCCGG CGAGGTCACC TCACTTTCAA TCAGTGATTT TTATACGCAA 
TACGCCATCG CCCCGTTTCC GCACCAATAG
 
Protein sequence
MAIASMTRFL LVLILIIASS PGIAGRSLCP GNFIHDETPD IHYDEEICFT AFAVLYSYAN 
KGPVISAEHL TAERVKAAEK LPRRNAFHRE HQIPTAAQSS SSDYEYSGYD QGHMTPAGDM 
PDAQTQHESF SMSNMTPQLP QLNRLSWRKT EEYVRKLALQ DGEVWVITGA LYGKERIGNG 
VSVPTLIYKA VSSQSGQQVF VGDNTSGEVT SLSISDFYTQ YAIAPFPHQ