| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2101 |
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| Symbol | |
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| ID | 8119578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 2417817 |
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| End bp | 2420807 |
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| Gene Length | 2991 bp |
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| Protein Length | 996 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644852487 |
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| Product | virulence protein SrfB |
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| Protein accession | YP_003004425 |
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| Protein GI | 251789704 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4457] Uncharacterized protein conserved in bacteria, putative virulence factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.485663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCAA CCCTGACTGA CTATAAACAA CACATTACGC TAATTCAGAA TAGCGGCATT
CAGTTTCTTG ATTTTGCACT GAAGCTCACG CCGGCGCGCT CAGGCTTCGC CAATCGTTTC
GTGCGCAAAA GCGCCAACGG GCCGCTACTG CGACTGACGT ATAACGACCA CAGCGGAAAA
TACACATTGC CGAGTGCGGT GCAGGTGCTG CCGGAAGCGG TTAACCCGGA GTCCAGCTAC
ACGCTGGAGC AGTCGCTACG CCTGCTCAGC AACGTGTGGT TGCCGCTACC GTTCTTCCGC
TTTAACCCAC CGCGTACCTT CATGGGCGGC CCGAACAACT GGGCGCGGGT ACAGGTGCTG
GAACTGGGCG AGCCCGACGA TGACGGCAAC ACTCACCGCC TTTGTCTGGC GTTCGATACC
CGCGTGTATC CGGAAAGTCA TGATCTGGAA ACGCTGGCCC CCAGCGAAAA CGACATCAAC
GCCGGGCGGC TGTTCACGCT GGCCTACCAC AGCGAAGAAC TGGACGATTT TCTCGACCAG
ACCTGGGTGG ACGGCTGGCT GCGCGAAGCC TTTTCTCAGC AAGCGCTTGC GGTAGAAAAC
CGCAAACCTC GCGATATCCG CCAGAATCTG CGTGAGTTCG AATATCAGGC GCATTATCTG
AATCTGCTGG ATATTATGGC GACGCTGCTG AATGTACCGG AAATCCGTAT CACCAGCAGT
ACCTTGAAAG AACCGGCCAT TAATGTCGAT CTGATTCTTG ATGTCGGGAA CTCCCATACC
GCCGGAATTC TGGTGGAGGA TCACGCCGAC GAAAGCAACG GCCTGCGGCA AACCTACGAG
TTGCAGATCC GCGATTTAAG TCAGCCTCAT TATTTGTACA ACGAGCTGTT CGACAGCCGG
GTGGAATTCG CGCAGGCGCG TTTTGGCAAG CAGAATTTCT CCTTTGAAAG CGGGCGTGAC
GATGCCTTTA TCTGGCCGTC GATGACCCGT GTCGGACGTG AGGCCAGCCG TCTGGCGTTG
CAGCGCCAGG GAACGGAGGG CTCCAGCGGT ATTTCCAGCC CGCGTCGTTA TTTGTGGGAC
GAAGAACCCT ATGTGCCGGG CTGGCGTTTC AGCCAAACCA CCAGCCCGCG GCAACAGGAG
CCGCTGGCAA GCGCCTTGCC GTTGACCATG CTGGTGAACG ATGAAGGACA ACCGCTGTTC
AGCCTGCCGC TGGACGAACG TCTGCCGGTA TTTGACCCGC ACTACAGCCG TAGTTCCGTG
ATGACGTTCA TGCTCTCCGA GCTGCTGGCG CAGGCGCTGA TGCAGATGAA CAGCGCCGCC
CAGCGTCTGA AAATGATCCA TGCCAACGCG CCGCGTCAAT TGCGCAACAT CATTCTGACC
CTGCCGTCGG CCATGCCCAA ACCGGAACGC GAGATTTTCC GGCGCCGGAT GATCGAAGCG
ATCGGTCTGG TATGGAAAGC GATGGGCTGG CACCCGGCCG ATGAGGACTT CCTGACGGAA
GAAGGCCAGC GCAACAGCAG CGTGCCGGTG CCGGACGTTC AGATGGAGTG GGATGAAGCC
ACTTGCGGGC AAATGGTGTA CCTCTACAAC GAAGCGCAGG TGAATTTCGG CGGCAGAGCG
GAGGCGTTCT TCGCCAGCAT GGCTCGCCCG GATAAGGAAC TGGCGGATGA CGAACAGCCA
GGAAAAACCT TGCGTATCGC CTCGATTGAT ATCGGCGGCG GCACCACCGA TCTGGCGATT
ACCCAATACT GGCTGGATGA CGGCGTCGGC AGCAACGTCA AAATCATCCC CCGGCTGCTG
TTTCGTGAAG GGTTTAAAGT CGCTGGCGAC GACATTTTAC TGGATGTGAT CCAGTTGTAT
GTGCTGCCGG CCTTACAGGC TGCGCTGAAA AAAGCCGGCG TTGTCAGCCC GGATGGCCTG
ATGACCCGGT TGTTCGGCAG TGAAGGCCGA ATGGACGGTC AACTGACATT GCGCCAGCAG
GTTACGCTGC AGATGTTCAT TCCTATCGGT CAGGCGATTC TGGAAGCTTA TGAACGGTTC
GATCCGCTCG ATCTGAATGC GGAAATCGAC ACCACGTTCG GTGAAATGCT GCCGCAAACG
CCGACGCGCA AGGTACTGGA GTACATCAAT AACGAGATCC AGCGGGAACT GCCGGATGAA
GAAACGCCGT TCGACATCCT GCACGTGCCG TTGATCCTGC GTCTTGGCAA ACTACACGGT
GAATTTCTGG CGAATCGCAT GAGTATTACC CAACATCTGC GATTGATGTC GGAAGTCGTT
TCGTTGTATG CCTGCGACGT GTTGTTGCTC ACCGGTCGGC CGTCTCGCTT CCCCGGCATT
CAGGCGTTGT TCCGCCATCT GCAACCCTTG CCGATCAACC GCATGATGTC GCTGGATGGG
TATCACACCA GCGACTGGTA TCCGTTCAAC AAACGCGGCC GGATTGAAAA CCCGAAATCC
ACCGCCGCGG TGGGGGCGAT GCTATGCCTG TTGGCGCTGG ATCTACGCCT GCCGGGTTTC
TACTTCAAAG CCGGAGATTT CGAACCCTAC TCCACCGTGC GTTATCTTGG CATGTTGGAC
AGTACCCACA CGCTCACCAC CGATAATGTC TACTATAACG ACATCGATCT GGATGATGCC
GATTTCTCGC TGGACGAACA GGCGGGTTTT GAAGTGCGTG GTTCGCTGTG CCTCGGTTTC
CGCCAGTTAG ACAACGAACG CTGGCCCGCC TCGCCGCTCT ACTCGTTATC GATAGTCGAC
CCGGAACTGG CCCGCAAAGT GGCCGGCGAC AGCGTACTGC ATGTGCGCCT GAAAGTGGTG
CCGGGCGATG ACAATCTCAC GCCGGAGCGT TTTGAAATAG CTCACGCGGT GTTGGGATCA
GGGCACACTA TTTCACCGCA TCAATTGAGG TTAAAACTGA ATACCTTGTC CAGCACGGTT
TCCGGCATGG CACATTACTG GATCGATAGC GGGAGCGTCT TCAAGAAATG A
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| Protein sequence | MLATLTDYKQ HITLIQNSGI QFLDFALKLT PARSGFANRF VRKSANGPLL RLTYNDHSGK
YTLPSAVQVL PEAVNPESSY TLEQSLRLLS NVWLPLPFFR FNPPRTFMGG PNNWARVQVL
ELGEPDDDGN THRLCLAFDT RVYPESHDLE TLAPSENDIN AGRLFTLAYH SEELDDFLDQ
TWVDGWLREA FSQQALAVEN RKPRDIRQNL REFEYQAHYL NLLDIMATLL NVPEIRITSS
TLKEPAINVD LILDVGNSHT AGILVEDHAD ESNGLRQTYE LQIRDLSQPH YLYNELFDSR
VEFAQARFGK QNFSFESGRD DAFIWPSMTR VGREASRLAL QRQGTEGSSG ISSPRRYLWD
EEPYVPGWRF SQTTSPRQQE PLASALPLTM LVNDEGQPLF SLPLDERLPV FDPHYSRSSV
MTFMLSELLA QALMQMNSAA QRLKMIHANA PRQLRNIILT LPSAMPKPER EIFRRRMIEA
IGLVWKAMGW HPADEDFLTE EGQRNSSVPV PDVQMEWDEA TCGQMVYLYN EAQVNFGGRA
EAFFASMARP DKELADDEQP GKTLRIASID IGGGTTDLAI TQYWLDDGVG SNVKIIPRLL
FREGFKVAGD DILLDVIQLY VLPALQAALK KAGVVSPDGL MTRLFGSEGR MDGQLTLRQQ
VTLQMFIPIG QAILEAYERF DPLDLNAEID TTFGEMLPQT PTRKVLEYIN NEIQRELPDE
ETPFDILHVP LILRLGKLHG EFLANRMSIT QHLRLMSEVV SLYACDVLLL TGRPSRFPGI
QALFRHLQPL PINRMMSLDG YHTSDWYPFN KRGRIENPKS TAAVGAMLCL LALDLRLPGF
YFKAGDFEPY STVRYLGMLD STHTLTTDNV YYNDIDLDDA DFSLDEQAGF EVRGSLCLGF
RQLDNERWPA SPLYSLSIVD PELARKVAGD SVLHVRLKVV PGDDNLTPER FEIAHAVLGS
GHTISPHQLR LKLNTLSSTV SGMAHYWIDS GSVFKK
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