| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1467 |
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| Symbol | |
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| ID | 8120509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1679797 |
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| End bp | 1685643 |
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| Gene Length | 5847 bp |
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| Protein Length | 1948 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644851859 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003003805 |
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| Protein GI | 251789084 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.160999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGACC CGATAGGCGG TTTTCGCCGC ATTCAGGACT TCTTCATTTC GTATATAGAA
ACTAACTTCC GAATTGCCGA TCCTTTCGTT ACTGCCTCAA GACGCAATCT TTTGAATAGC
AGTGGAGAAT TTGCCGCGGA GCCCTACATT GAGCCTGTTT TACGATATGA GTCTTCTGAT
AAAACGCTTG AAGCTCTGGC AGAGATGGAC GGTGGGCCGC TGAATAGCTT GTCTCGCAAA
GGCCGTAAGG CGTTCGCCGA ACTAGCGTTA TCCGGTCTGT TCGATTCGAA ACCTGGTGAT
GAAGTCTGGC CGCGTCGTTC GGTCCATGCG CCGTATAGCC ATCAGACTGA AATGCTTAAA
CGCGGTATTC GTCCTGGTAG CCCGGGAATT GTGACATCGG GAACAGGTTC GGGAAAAACG
GAAAGTTTTA TGTTGCCTAT ACTGGCTGCA CTATCGAATG AGGCTGTCAG CTGGGCCGCG
CCTTGCGACG GTTATCTGCA AAATCGATGG TGGAACAGCG AAAAAACAAG CTGGATTTCT
CGTCGCGAAG GAGAAAAACG TCAGGCGGCA GTCAGGGCGC TGGTGCTTTA CCCGATGAAC
GCTCTGGTTG AAGATCAAAT GGCGCGTTTA CGTAAAACGT TGGATTCAGA TGACGCGCGG
CAGGTGATGG AGCATCGCTT TGCCGGGAAT CGAATTTTCT TTGGGCAATA TACCAGCGCA
ACACCGATTA CTGGCTATGC CAGCCATCCA CGTCTTTCCG GACTCAAATC GGAAAAAAGT
CGCCGTGCTC GTAATCTTGA AAAATTACGT AAGGCGTTGA AGCGAATTGA TAGCGATCAG
CAGGCTGCGC GCGCATTCGA CGAAAAAGAA AACCCTTCGG AAAAGACCCG ATATATATTT
CCTTCGACAG ACGGCGGGGA AATGATGTCT CGCTGGGATA TGCAGGCTGC CCCGCCTGAC
GTTCTCGTCA CTAACGCCTC AATGCTTGGG GCAATGCTTT CGCGCGAAGT CGAAGACGGT
ATTTTTGATG CTACGCGCGA ATGGCTGATG AATAACAACG ACGCGTACTT CTATCTGGTA
TTCGACGAGC TGCATTTAAT GCGTGGTTCC GCTGGAACCG AAACCGCGAT GTTGATTAAG
TCGCTGATTA TCAGACTCGG GCTTGACGAC CCGAAACATC GCTACAAACT GCGTTTGCTG
GCGTCTTCCG CATCGCTGCC GATGGATGGC GCGGATGGAG AACAATCACG GAAATACCTC
CGGGATCTCT TTGCGCCCTT TGGCACTTGC TGCGATTCTC TGGATCCCGG TACCGATAAG
CCTGATTTCT GGCGTAACTG CGTCATCCAG GGAAAACCTT ATATACCGCC GAAGCCAGAA
GGAAAAATCA CCGTGCGGCC TTTCGCCGCA TTAATGCGAG TTGCTCTTGA GGGGCAGGGA
AATGTCGTTC GCAATCTGAA CATGACGGAC GCGCTTAGTA AGGCTTTGTC TAATGTCTTC
CAGGCTTTGG GCGTGAAAGC GCAAAATGGC ATGCAAGGCA TTAAACAAGC AGCGGAAAAA
GCAGCTGCCC TGCTTACCAA CGCTTGTATA GAAGAAGGCA GCAAGTCGCC GCGAGCAATG
CCGCCGGGAC TAATCATTGA TAAGATTTTT CTGAAGGAAG ACTCGGATAA ACAAGATGAG
TTGGAATTAG CATTACGCGG GTTAATGCTG GTGCGCGCAC TGCCGGAATC CGGGATGGAT
TACGAGAAAC CTGCCAACGT TACACCAGCT TTTCGCGTAC ATACATTCGT CAGAAATATT
GAGGGTTTCT TCGCCTCCGT ATCACCGGGA GAACAAAAGG CAAAATTTGC TGATTTTTGT
CTGGAACGAG GACTATCCCA CGCACCTTCA GCCCCAGGCG GAGAGCGCGG TCGTCGTTTA
TTTGAAATGC TATACTGCGA AGCATGCGGC GATTTACTGC TCGGCGGTCA GAAGGGACAG
AATCACGGTA AAACAATCGA ATTATTACCT TCGGCGACCA ATCTGGAAAA TCTTCCCGAA
CGTCCCGGCG CTGAATATTA CGATGATATG ACGCTGGAAG AGTTTGCGGT TTTCTGGCCT
GTAGATATAG CCGGTCGGCC TCCTGTAGGT TGCGAAAAAG GTTGGGATGT CTGGGAAAAA
GCGGCGCTTA ATCCTGTTAC AGGCATTGTG ACCATTGCGC AGGAAACATC GACGACGAAT
ACTGACGCGG TTCGCGGGTA TCTCTATTTC CAGAATCCGA TTAAACCTAA AAAAGGCGAG
CCGGCGAAGA CCCCTTCTGC TCAGCCTTTC TGCTGCCCTA ACTGCGGCAT TGACTATTCC
AGCCGACCTG CCAGCAATCG TTCCAGAACG CCCATTCGCG CATTTCGAAC TGGTGTGACG
AAATCATCCC AACTGGTAGC AACGGAGCTA TTTGAATTAC TGCATGCAAT CGGCGCGGAA
GCAAAGAGTA TTGTTTTCTC AGACAGTCGA CAGGATGCGG CATCAATGGC GCTGGAAATC
GAACGCCTGC ACTTACGAGA TCTACGCAGG GAAATATTGG TCGCCGCTTC CAGAGCGATG
ATTAAGGAGG CTGAAAGCGG GTACATTTCA GACGAGGATA TTGAAGACAG GAAAGCCAAA
GCGAAACAAT CTGGAGATTA CGATGAGTAT ATCAGACTGC ATGACCTTCA AAAAAGCCAA
AGCGGAATTA CTGAACTTTG TAAATATCGA CGGATAAAAA TCGACAAATT ACTGGAGTCT
GAAGGTGACT CAATCGGAAG AATCACATCT GAGCTCGTCG GGTTGGGGAT ATCACCCTAT
AAATATCGTT CTAATTCAGA TGAGAATGAT AGTGCTGTTT GGCATACAAA TTTCATTAAA
GAAGGGGGAA CTATTAGATT CAGTGAAAGG CTTCCTTCTC ATGAACGAAT GAAAATAAAA
ACGAAAATAT CTTACGATCA ATCTGAATTG ATAGATGATG TTATTTTCGC CAATACTTTT
TTCGCGCTGG AAGAAACAGG GCTGGCATAC CCATGCATCT CAGATAAAGA TGACATGCCA
GAAATTGATG CTTGGCTAAG GGTGTTTTCC GGTGCCTATC GTGTTAAAGA GAATAAATAT
TTCGATGCAA GCCGTACTCG TGATTGGTAT GTTGGGAAAG ATGTTGAAAA AGAGAAAGTT
AAGCGCGTCG CCAGAGTCTT ATTCGGTGAT AGCGGGTATC AAGATGGTTT AACGCGTATC
TTAAATCAAC TTTCTCTGCT TGAGCATAAG GCAGGACTAA TCAATATCGG TAAGTTGTTC
CTCAAAATCA GCAAACCAGG CGATCATTAC TGGCAATGCG GAAAATGTGG GAGAATTCAC
TTACATTTAG GTTTTAAATA TTGTACCCGT TGCGTGAATG CACTCGACCT TGAACCCAGT
GGAATTGTCG AAGATCTATG GGAGGAAAAT TTTCTTGGTA AGCGCATTGT ACGTGGAGAG
CGAGATGGAG TTAAACGTTT CCGGCTGAAC GTCGAAGAAT TAACGGGACA GACGGATGAT
TTCTCCGATC GTTTGCGTAA GTTCAAAGGG ATTTTCGTCG ATAAGATGAG TGAACTTGAA
AAGCTTGATT CGGAAATAGA CATGCTTGCC GTTACCACGA CAATGGAAGT CGGAATCGAT
ATCGGCTCAC TTCAGTCGGT TTATCAGGCC AACATGCCGC CTCAGCGTTT TAATTACCAG
CAGCGCGTTG GTCGTGCTGG ACGACGCGGT CAGGCCTTTT CTTTCGTGAT CACATTTTGT
CGCGGACGTA CTCATGATGC TTACTATTTC GCTCATCCTC ATGCGATCAC CGGAGATCCG
CCACCGCCGC CTTTCCTGGC GGTAAATCAC AACTCCATTC CATTAAGACT TATGCGGAAA
GTATGGCTTA GAGCTGCATT TAATCTTTTA CGTGAAGAGG ATCATAAAAA CGGAACAACT
TTCCCTGGAG ATAAACTCGT TCCACCTGAT ATTCATGGCG AATATGTTTC TACGCATGAT
TACTATCATA GCGATGAAAC GAATTGGGCT GAACGATTGC TGGGAGCGTT GAAGGCAACT
CAGAATATAC ATGATCGCTT TATTGAAGCA GCAACGTTCG ATGATGTTCA AAAACAACGT
CTTTATTCCG CATTAAATGC GGAAGCAATA ATTGATGAAA TCGCTGAACT GAACGCTTAC
GTCCCTGAAG AAAATATGGG ACTTGCACGT TTCCTGGCCG AGCACGGTAA ACTGCCTATG
TATGGAATGC CGACTCGGGT GCGCAATCTT TATTTGGGAT TGCGTAAAAC AAAAGGTCTA
AACGCTCAAG AAGAATACGA ATGGTCGACG ATGGATCGCG ATCTTGATCT CGCAGTTTTC
GAGTATGCTC CAGGCTCGGT ATTGATTAAG GATAAGAAAA AGCATGAGGT AATAGGCTTC
ACAGGCAATT ACCAGGAACC ACAGGTCCAG AACAACCGAA TATCGGATCT CTCGACGGTA
GGCTCATGGC AGGAGTCATG CAGCCATGTA GCAATTTGCC CGGCGTGTGG TTCCGCCAAG
CTGGAGCTAC ATAAACCCGA CAACGACATT AATTGCGAGG ATTGTCGCAC GCCTATCGGT
TCTGACGAAT TCAGGCTTTA TATCACGCCA GCCGCTTTTC GCACGGATTT CAAACCCAAA
GACGATATGG ATAGTTTTAT CCGTATGTCG TTGAAAACCA CGGCGACAGT GTTGCATGAG
GGTGTTCCAA CAAAATTCGA TTCTTTCACT GTGCAACGCG GCGAAGTGAC CATTCTGCGC
CTCAACGATG GCCCCATTAA TGGAGAAAAG GAAGGTGAAC GATTTACTGT TGACTTGGTG
AACGATCAAA AAGCGCCGAT GCCCTTTTCT ACTTATTGTC CGTCTGTTAA AGGCGAACAG
GCAATCGATT CAGGCTGGCT GAAATCGCAC AATAATCCAC GCTGGCAGTG TAGCGGCAAG
AAAAAAAATT TTGGCCTCGT ATCAAGTAAA GAAACGGAAT CGCTTCACAT CGAATTAACG
AAATTCGATG CTCGCCTTAA TCTGAATATG GTCGCCAGAT ACGGTGAGTA CATGAATTTG
CCTACGCGCG CAGCAGCTAT CAGCGCAACA CAGATATTGA CGCATAAGGC TGCGCTCTAT
CTGGATGTTT CGCCAGATGA GTTCGAAACG CTTGAACCCC GACTCCATCA TGAGAAACCT
ATATTGCAAA TTGCAGACGC ATTGATTAAC GGTTCAGGGT TATGCAGACG ACTTGCCGAG
CCAGCCGTCG TTGGGGATCC GCCTTTGATA GTCATATTAT TGAATGAGAT TCTGGAAGAT
AAGCGCGTCT GGCCAATGGT TGATTTTCTT AAGAAGGATC ATCCCGCTCA GTGTCAAACT
GCCTGTTACA AGTGCATACA GCGCTACAGT AACCGCCAGT ATCATGGTTT ACTGGACTGG
CGTTTAGGAA TGGCATACTT ACGAGCAATG GTTATACCTG AATTTGCCTG CGGTCTGAAC
GATGATGACT GGAGTCATCC TGAAATGATC GGATGGCGAG ATAGAGCATT TGAGCTGGCG
GAAGACGTCG CGGAGTTACG GCCTGAAACA ATCAAATTGT CGAAAGAGTA TTCGTTACCT
ATTCTTATCG AAATACAGGA TGGGAAAGAG CTTTGGCGAG CGGCCGTAAC GCATCCCTTA
TGGCAATGGA GAGATGCCGA ACGTGATGCC CTGATTGACT CTTTTGGATT GACTGACGGG
GAGTCGCCGC TACTATTCAT TGATACGTTT GAACTGGAAA GACGGCCGCT GCGTGCGTTG
GCGAACCTTA ACAGAGTTAA AATATAG
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| Protein sequence | MLDPIGGFRR IQDFFISYIE TNFRIADPFV TASRRNLLNS SGEFAAEPYI EPVLRYESSD
KTLEALAEMD GGPLNSLSRK GRKAFAELAL SGLFDSKPGD EVWPRRSVHA PYSHQTEMLK
RGIRPGSPGI VTSGTGSGKT ESFMLPILAA LSNEAVSWAA PCDGYLQNRW WNSEKTSWIS
RREGEKRQAA VRALVLYPMN ALVEDQMARL RKTLDSDDAR QVMEHRFAGN RIFFGQYTSA
TPITGYASHP RLSGLKSEKS RRARNLEKLR KALKRIDSDQ QAARAFDEKE NPSEKTRYIF
PSTDGGEMMS RWDMQAAPPD VLVTNASMLG AMLSREVEDG IFDATREWLM NNNDAYFYLV
FDELHLMRGS AGTETAMLIK SLIIRLGLDD PKHRYKLRLL ASSASLPMDG ADGEQSRKYL
RDLFAPFGTC CDSLDPGTDK PDFWRNCVIQ GKPYIPPKPE GKITVRPFAA LMRVALEGQG
NVVRNLNMTD ALSKALSNVF QALGVKAQNG MQGIKQAAEK AAALLTNACI EEGSKSPRAM
PPGLIIDKIF LKEDSDKQDE LELALRGLML VRALPESGMD YEKPANVTPA FRVHTFVRNI
EGFFASVSPG EQKAKFADFC LERGLSHAPS APGGERGRRL FEMLYCEACG DLLLGGQKGQ
NHGKTIELLP SATNLENLPE RPGAEYYDDM TLEEFAVFWP VDIAGRPPVG CEKGWDVWEK
AALNPVTGIV TIAQETSTTN TDAVRGYLYF QNPIKPKKGE PAKTPSAQPF CCPNCGIDYS
SRPASNRSRT PIRAFRTGVT KSSQLVATEL FELLHAIGAE AKSIVFSDSR QDAASMALEI
ERLHLRDLRR EILVAASRAM IKEAESGYIS DEDIEDRKAK AKQSGDYDEY IRLHDLQKSQ
SGITELCKYR RIKIDKLLES EGDSIGRITS ELVGLGISPY KYRSNSDEND SAVWHTNFIK
EGGTIRFSER LPSHERMKIK TKISYDQSEL IDDVIFANTF FALEETGLAY PCISDKDDMP
EIDAWLRVFS GAYRVKENKY FDASRTRDWY VGKDVEKEKV KRVARVLFGD SGYQDGLTRI
LNQLSLLEHK AGLINIGKLF LKISKPGDHY WQCGKCGRIH LHLGFKYCTR CVNALDLEPS
GIVEDLWEEN FLGKRIVRGE RDGVKRFRLN VEELTGQTDD FSDRLRKFKG IFVDKMSELE
KLDSEIDMLA VTTTMEVGID IGSLQSVYQA NMPPQRFNYQ QRVGRAGRRG QAFSFVITFC
RGRTHDAYYF AHPHAITGDP PPPPFLAVNH NSIPLRLMRK VWLRAAFNLL REEDHKNGTT
FPGDKLVPPD IHGEYVSTHD YYHSDETNWA ERLLGALKAT QNIHDRFIEA ATFDDVQKQR
LYSALNAEAI IDEIAELNAY VPEENMGLAR FLAEHGKLPM YGMPTRVRNL YLGLRKTKGL
NAQEEYEWST MDRDLDLAVF EYAPGSVLIK DKKKHEVIGF TGNYQEPQVQ NNRISDLSTV
GSWQESCSHV AICPACGSAK LELHKPDNDI NCEDCRTPIG SDEFRLYITP AAFRTDFKPK
DDMDSFIRMS LKTTATVLHE GVPTKFDSFT VQRGEVTILR LNDGPINGEK EGERFTVDLV
NDQKAPMPFS TYCPSVKGEQ AIDSGWLKSH NNPRWQCSGK KKNFGLVSSK ETESLHIELT
KFDARLNLNM VARYGEYMNL PTRAAAISAT QILTHKAALY LDVSPDEFET LEPRLHHEKP
ILQIADALIN GSGLCRRLAE PAVVGDPPLI VILLNEILED KRVWPMVDFL KKDHPAQCQT
ACYKCIQRYS NRQYHGLLDW RLGMAYLRAM VIPEFACGLN DDDWSHPEMI GWRDRAFELA
EDVAELRPET IKLSKEYSLP ILIEIQDGKE LWRAAVTHPL WQWRDAERDA LIDSFGLTDG
ESPLLFIDTF ELERRPLRAL ANLNRVKI
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