| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1389 |
|---|
| Symbol | |
|---|
| ID | 8118464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1577321 |
|---|
| End bp | 1579156 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644851784 |
|---|
| Product | Citrate transporter |
|---|
| Protein accession | YP_003003730 |
|---|
| Protein GI | 251789009 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0150325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCA GTTCGCTGGT CTGGGTCGTC ATTTTGCTAT CGATTGCCAT TGTGCTGTTT
GCCACCGGTA AACTTCGTAT GGATGTGATT GCACTGTTGG TGATCGTAGC GTTTGTATTG
AGTGGTACGC TAACTCTGCA GGAGGCGCTA ATCGGATTCA GCGATCCAAA CGTATTCCTG
ATCGCGGCGT TGTTTGTGAT CGGCGAAGGG TTGGTGAGAA CCGGGGTTGC CTATCAGGTC
GGCGACTGGC TGATGCGTGT GGCCGGCCAG AGCGAAACCC GTATGCTGAT TCTACTGATG
TTGACGGTGG CGCTACTGGG CGCTTTCATG AGTTCTACCG GTATCGTCGC TATTTTTATT
CCCGTGGTAC TGAATGTGGC GGCGCGGATG AAAACCACTC CCGCCCGATT GATGATGCCG
CTGGCGTTCG CCGGGTTGAT TAGCGGCATG ATGACGCTGG TCGCGACTCC GCCCAATATG
GTGGTCAGTA GTGAACTGAT GCGTATCGGA ATGGACGGAT TCAGCTTTTT CAGCGTCACG
CCGATCGGCA TGGTGGTGTT ACTGACCGGT ATTGTTTATA TGCTGGTGGC GCGTTTCTGG
CTGACCGTAA CTGACGGCGA TGGTGTGAAA GAGGGCTGGA AACGTAAAAC GTTCCGTGAT
CTGATTCGAG AATATCGCCT GACCGGGCGG GCGCGTCGGC TGGCGATACG AACCGGATCG
CCGTTAATCG GCCAACGCCT GGACGATTTG CAATTACGCC AGCGCTATGG CGCGAATGTG
GTGGGGATTG AGCGTTGGCA AAAATTCCGA CGCATTATGG TGAGCGTGAG CGGTAATAGC
GAATTGCGGC TGAATGATGT GCTGCTGATC GATATGTCGG CATCGGATGT GGATCTGCGT
GAGTTTTGCG CCACCCAGCG GCTGGAGCCG ATGGTATTGC GCGGTGAATA TTTCTCTGAA
CAGGCGCGTG ATGTAGGCAT GGCGGAGGTG TCGCTGATCC CTGATTCCGG ACTGCTGGGC
AAAACGTTGC AGGAAGCGTC GTTTCGCAGT CGCTACGGGT TGACTGTGGT CGGCATTCGC
CGCGACGGTG AAGCGTTGGA AGGCACATTG GCTGATGAAG CGTTAAAGTT GGGCGATATC
CTGCTGATTA TCGGTGACTG GAAGAATATC CGCCTGCTGC ATCAGCACAA ACGCCACTTT
ATTGTGCTCA ATCTGCCGGC GGAAGTCGAT GAAGTCGCAC CTGCCAGTAA TCAGGCCCCA
CATGCGTTAT TTTGTCTGGC GCTGATGGTG GCGATGATGC TCACCGATGA GATTCCGAAT
GCTATTGCGG CCTTGATTGC ATGTCTGTTG ATGGGGCAAT TTCGCTGTAT TGATATGGAC
AGCGCTTACC GTGCGGTGCA CTGGCCGAGC CTGATTCTTA TTGTCGGGAT GATGCCGTTT
GCGCTGGCGC TACAACAAAC CGGCGGCGTA GCACTGGTGG TCAAAGGGTT AATGGAGATT
GGCGGTGATG CGGGGCCGCA TGTCATGCTG GTGTGCCTGT TTTTGCTGTG CGCACTGACG
GGGTTATTTA TATCCAATAC GGCGACGGCA GTATTGATGG CGCCGATTGC CGTCGCCGCC
GCGGAACAGA TGCAAGTTTC ACCGTATCCT TTTGCGATGA TCATCGCGAT TGCCGCCTCG
GCGGCGTTTA TGACGCCCGT TTCCTCACCG GTCAATACAT TGGTACTGGC ACCCGGTGGG
TATCGCTTTA GTGATTTTGT TCGGGTTGGT GTACCGTTTA CGCTGCTGGT GATGGTTGTG
AGTGTGGTGA TGGTGCCATG GTTATATCCA TTCTGA
|
|---|
| Protein sequence | MLSSSLVWVV ILLSIAIVLF ATGKLRMDVI ALLVIVAFVL SGTLTLQEAL IGFSDPNVFL
IAALFVIGEG LVRTGVAYQV GDWLMRVAGQ SETRMLILLM LTVALLGAFM SSTGIVAIFI
PVVLNVAARM KTTPARLMMP LAFAGLISGM MTLVATPPNM VVSSELMRIG MDGFSFFSVT
PIGMVVLLTG IVYMLVARFW LTVTDGDGVK EGWKRKTFRD LIREYRLTGR ARRLAIRTGS
PLIGQRLDDL QLRQRYGANV VGIERWQKFR RIMVSVSGNS ELRLNDVLLI DMSASDVDLR
EFCATQRLEP MVLRGEYFSE QARDVGMAEV SLIPDSGLLG KTLQEASFRS RYGLTVVGIR
RDGEALEGTL ADEALKLGDI LLIIGDWKNI RLLHQHKRHF IVLNLPAEVD EVAPASNQAP
HALFCLALMV AMMLTDEIPN AIAALIACLL MGQFRCIDMD SAYRAVHWPS LILIVGMMPF
ALALQQTGGV ALVVKGLMEI GGDAGPHVML VCLFLLCALT GLFISNTATA VLMAPIAVAA
AEQMQVSPYP FAMIIAIAAS AAFMTPVSSP VNTLVLAPGG YRFSDFVRVG VPFTLLVMVV
SVVMVPWLYP F
|
|---|
| |