| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1350 |
|---|
| Symbol | |
|---|
| ID | 8118425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1536955 |
|---|
| End bp | 1537866 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644851745 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003003691 |
|---|
| Protein GI | 251788970 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTCG TTCGTTTAAG AACCTTCATC GAGGTGTATC GACAGCGTTC CATCAGCGGC
GCCGCCCGTA CGCTCAATCT GACGCAACCG GCGGTGTCGC AGCATATCGC CGGTCTGGAA
GCCTCAATTG GGCATCCCTT GTTTGCACGG CAAACACGCG GGGTTATTCC TACCTCGGCG
GCGGATGAGC TGGCAGCGGA TATCGGCGAC CGGCTGGATG AGGCGGAAAA CGCGCTGGCA
TCGGCAAAAG CGCGTTCGCT GGAACTGGCC GGCGCATTGC AAATCATCGG GCACGCGGAT
TTTCTGGCTG AAGTCGTCGC CAAACAATTA CTGCCGCTAT TGGAAGTGGG GGTACGCGTC
CGGATGCAAA CCGGCGATTA CGATGTGATT GTCCAAAGTT TGATCGAAGG TTACTGCGAT
CTGGGGATCT CCGCCGCGCC GTCAAATGAC AACCGGTTAA AAAGCGAATT GATGCTGACC
GATGAAATTA TGGCGGTTGC CGCGCCGCAG GTGGTCGCCC GGCTGGCTAA AGCGCCGGAC
ACGCTGGCGG CAATGCAAAC CGAACCGCTA CTGGCCTATA GCCTGACGCT GCCGCTTATC
GATAACTGGT TTACCGCCAA TAAAGTCCAG GCGCCTACCA TTCTCCCGGC AATGGTGGGC
CAGGATTTAC GCGCGCTGTG CAGTTTATTG TGTGAAGGGT TTGGCTGGAG CGCACTTCCC
GCCTATTTGT GTACGCCGTA TATCGAACGA GGTGAGCTTT GTGAAATTCC CGCGCCGATT
GCACGGGCCA ACCGCAGTTA CTATTTATTG TGGCAACCCA GTGCGTTGCG CCAGCCGCGC
GTCGCTCATG CCAGGCAGGC ATTGCTGTTT CGGTTAAGGC AAAAACACGG AGATCCGCAT
CGGAACACAT AG
|
|---|
| Protein sequence | MSLVRLRTFI EVYRQRSISG AARTLNLTQP AVSQHIAGLE ASIGHPLFAR QTRGVIPTSA
ADELAADIGD RLDEAENALA SAKARSLELA GALQIIGHAD FLAEVVAKQL LPLLEVGVRV
RMQTGDYDVI VQSLIEGYCD LGISAAPSND NRLKSELMLT DEIMAVAAPQ VVARLAKAPD
TLAAMQTEPL LAYSLTLPLI DNWFTANKVQ APTILPAMVG QDLRALCSLL CEGFGWSALP
AYLCTPYIER GELCEIPAPI ARANRSYYLL WQPSALRQPR VAHARQALLF RLRQKHGDPH
RNT
|
|---|
| |