Gene Dd1591_1303 details

Gene Information

• Locus tag: Dd1591_1303
• ID: 8118697
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 1479529
• End bp: 1480068
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644851698
• Product: general secretion pathway protein H
• Protein accession: YP_003003645
• Protein GI: 251788924
• TIGRFAM ID: [TIGR01708] general secretion pathway protein H; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGTCAGC GGGGATTCAC GCTGCTGGAA ATCATGCTGG TGGTGTTGCT GGCCGGTGTG 
GCCGCCACAT TGGTGATGAT GGCGATTCCT GCGCCGAAGC AGCAGGATAG CGGCTGGCAG 
ATTGCCCGCT TCAAAGCGCA ATTGCAGTAT GCGGTGGAGG ACAGCCAGAT GAATGACCAT 
ATTCTTGGCG TTTATATTCA GCCCCACCGC TGGCAATACG CCTTGCTACA GCGTCAGGTG 
GTGGAGAATT CGCCGGAAGA ACAACAGCGT CTGCGCTATG TCTGGATACC GTGGCAACCG 
TACCGTATGT CGGTGCCCAG CGAGTTGCCG GACAGCTTTA ACATCGAGCT GTCTACACAA 
GTCGGGGCCG CGGGAGACGG CACCGGTTTT TCCCCAGGCA ACGGCGATCC TCATATTCTG 
ATTCTGCCGG GCGGTGAAGT GACGCCATTT CGTCTGACCT TGCGTAATGG CAACGATTCC 
GCCTGGTTAC AGGTGGATAC CAATGGTCAG GTGCACACGT CGCCGGAAGC GGAGCAGTAA 

 

Protein sequence

MRQRGFTLLE IMLVVLLAGV AATLVMMAIP APKQQDSGWQ IARFKAQLQY AVEDSQMNDH 
ILGVYIQPHR WQYALLQRQV VENSPEEQQR LRYVWIPWQP YRMSVPSELP DSFNIELSTQ 
VGAAGDGTGF SPGNGDPHIL ILPGGEVTPF RLTLRNGNDS AWLQVDTNGQ VHTSPEAEQ