| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1186 |
|---|
| Symbol | |
|---|
| ID | 8118738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1347437 |
|---|
| End bp | 1348105 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644851583 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003003532 |
|---|
| Protein GI | 251788811 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATG GATGGAATAA TTTTTATCAT GATTTGATGG AGCAACTCCC GTTGGTGCTT
AACGGAATTG TTGGGACATT TAAACTTGCG GCAATTGTCT CCTTATCAGG TTTTTTATGG
GGTATTGTTA TTTTTTTTCT CAGTATCAGC AGTCAACCGG CGATTAAACA TCTGACCAAG
ATATATATGG ATTTCTTCAT AGGCACACCA TTAATTCTTA TTTTATTTGT TATTTATTAT
GGCTTGCCGC AGACGGGTAT CCATTTGTCA CCTTTCACGG TGGCAGTCAG CGGTTTTACA
CTTAATGTCG GAGCCTATAA TGCAGCCTAT ATGACCACAG CCTACAACGC CCTGAACAAA
CACGAGACTG AAGCTGCCGT CGTCCAAGGA TTCAGCAGTT GGCAGATTTT CCGTTTAATA
ATATTACCGC AGGTGCTCAT CACCTCAGTA CCTGCGCTGA CTAACCAAGT CATCAATAAT
ATTAAGGACA GCACCATTGC TTTCCTTATC CAGTACACTG AATTTTTTTC CCGCATCCAG
GAAGTCGCTT CAACGAACTT TGAATTTTTC AATGCCTATC TATTTGCCGC GTTGGTTTAT
CTGGTATTCA TTACTTTTAT CGTCATTCTA TCCAGAGTCA TTGAACGCAA ACTGGGTATC
GCGGAATAA
|
|---|
| Protein sequence | MFDGWNNFYH DLMEQLPLVL NGIVGTFKLA AIVSLSGFLW GIVIFFLSIS SQPAIKHLTK
IYMDFFIGTP LILILFVIYY GLPQTGIHLS PFTVAVSGFT LNVGAYNAAY MTTAYNALNK
HETEAAVVQG FSSWQIFRLI ILPQVLITSV PALTNQVINN IKDSTIAFLI QYTEFFSRIQ
EVASTNFEFF NAYLFAALVY LVFITFIVIL SRVIERKLGI AE
|
|---|
| |