| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1163 |
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| Symbol | |
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| ID | 8118715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1329170 |
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| End bp | 1329688 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644851560 |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003003509 |
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| Protein GI | 251788788 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.838462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTC CATGCTATAT CAGCATCGAA GGTAAAACGC AGGGCAACAT CACCGCCGGT
GCCTTCACCT CCGACTCCGT CGGCAACATC TACGTGCAGG GTCACGAAGA CGAGATGCTG
GTGCAGGAAT TCAAACACAT CGTCACCGTC CCGACCGACC CGCAGTCCGG CCAGCCTGCC
GGTCAGCGCG TGCACAAACC GTTCAAGTTC ACCGTTGCGC TGAACAAAGC CGTCCCGCTG
CTGTATAACG CGCTGGCCTC CGGCGAAATG CTGCCGACCG TGACCCTGAA ATGGTATCGC
ACCTCTGTCG AAGGCAAGCA GGAGCATTTC TTCACCACCA CCCTGACCGA TGCCACCATC
GTCGACATCA ACAACCAGAT GCCGCACTGC CAGGACCCGT CCAAGCAGGA CTACACCCAG
CTGATTGAAG TGTCACTGGC CTACCGCAAG GTGGACTGGG AGCACACCGT GGCCGGGACT
TCCGGCTCTG ACGACTGGCG CGCGCCGATC GAAGCGTAA
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| Protein sequence | MPTPCYISIE GKTQGNITAG AFTSDSVGNI YVQGHEDEML VQEFKHIVTV PTDPQSGQPA
GQRVHKPFKF TVALNKAVPL LYNALASGEM LPTVTLKWYR TSVEGKQEHF FTTTLTDATI
VDINNQMPHC QDPSKQDYTQ LIEVSLAYRK VDWEHTVAGT SGSDDWRAPI EA
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