| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1050 |
|---|
| Symbol | |
|---|
| ID | 8120323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1211491 |
|---|
| End bp | 1212435 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644851446 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003003401 |
|---|
| Protein GI | 251788680 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAATT CTAAAGTTCA TGATGAGCTG ATTGCATATA CAGAAAGAGA GTTGGAAATC
TTGCAGTCAA ACTATCAGTT TAACCACAAA TTCAAAAGTC ACATGGAGCG CCACTTCTTT
AAAGACAATC ATATATATAT TGAAAAGCAA ACTCGGTTTA CCAGAGTGCC GTTACACTCC
CATGGATTTA TTGAGCTGAC TTATGTATAC CAGGGGGGCA TGAATCAAAA AGTAAATGGT
CGTGCTATTA CCATGGGAAA GGGTGACATA ATATTACTTA ATCAGTTTGC TAAACATGAA
GTAGAGGCGG CGGGAAAAAA TGACATTATC ATCAACTTTA TCATCAAGAT AGGTTTTTTT
GGGAAACTCA TGTCTCTATT TGATCAGGGG AATTTAATCT CTGATTTTAT ATTGTCTTCT
ATAAATGGAA AGAAAAGATA TGGAGAACAT ATACTTTTCA GAGTTGGTGA TATTGAGTCG
ATACAAACTA TAGTCGGCGT GATCATTAGT GAGATTTATA GTGATAACAC ACTAAAGCAA
ACGCGGGTTA ATTTTCTTGT TGGTCTGTTA ATCACCGAAC TTCTGTCAAA TATTGAGTCA
AGTGACTATT ATGCTAGTGG GAGCTATAAT GAGTCGCTTT CAACAACAGT ATTAAAATAT
ATCGATGATA ATTATCAAAC TGCAAGTCTG AAAGAGATAT CAAACCAGCT GAGGCAACCA
AATTATAAGA TAAGCAAGTT GCTAAAAGAT TTCACAGGTA AAACATTTAG TGAACTGGTT
ATTGAGAAAA GAATAGAAAA AGTTATCTTT CTTTTAAGAA ACACCAATCA TTCAATTATT
GACATCATCA ATATGACCGG ATACGAAAAC GCCTCTCACT TTTATAAGAT TTTCAAAGAA
AAATTCCATA TGAGTATAAA AGAGTATAGA GATAAGAATG TTTAG
|
|---|
| Protein sequence | MVNSKVHDEL IAYTERELEI LQSNYQFNHK FKSHMERHFF KDNHIYIEKQ TRFTRVPLHS
HGFIELTYVY QGGMNQKVNG RAITMGKGDI ILLNQFAKHE VEAAGKNDII INFIIKIGFF
GKLMSLFDQG NLISDFILSS INGKKRYGEH ILFRVGDIES IQTIVGVIIS EIYSDNTLKQ
TRVNFLVGLL ITELLSNIES SDYYASGSYN ESLSTTVLKY IDDNYQTASL KEISNQLRQP
NYKISKLLKD FTGKTFSELV IEKRIEKVIF LLRNTNHSII DIINMTGYEN ASHFYKIFKE
KFHMSIKEYR DKNV
|
|---|
| |