| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0929 |
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| Symbol | |
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| ID | 8117745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1077362 |
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| End bp | 1080334 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644851320 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_003003285 |
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| Protein GI | 251788564 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.379173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACGA CCGAAAACCA AATTGAGCTG GATCTTATTG CCCGGCTAGC TGAACTAAAA
TACACACTGC GGCCCGACAT TCGCGATCGG GCATCACTCG AAAAAAACTT CAGGGAGAAG
TTTGAAGCTC TCAATAAGGT GCATCTGACC GATAGCGAGT TTCAGCGTCT GCTCGATACT
ATTATTACAC CTGATGTGTA CAATGCAGCT CAGAAGCTAC GCAATATAAA CAGCTTCGAG
CGTGATGATG GAACACCACT GAACTACAGC CTGGTTAACA TTCGCGACTG GTGCAAGAAC
GACTTTGAGG TAGTGAACCA GTTACGCATC AACACCGATA ACAGCCATCA CCGCTATGAT
GTGATTCTTC TCATAAACGG TGTACCGGTT GTGCAGATCG AGCTTAAAAC ACTGTCCGTT
AGCCCACGCC GTGCCATGCA GCAAATCGTG GATTACAAAA CCGAGCCTGG CAATGGCTAC
GGTAAGACAC TGCTGTGTTT CATCCAGCTC TTCATCGTCA GCAATCGTAC TGATACCTGG
TACTTCGCTA ACAATAATGC GCGACATTTC AGTTTTAATG CAGATGAGCG CTTCCTGCCG
GTCTACCAGT TCGCCAGTGA AGATAACAAA AAGATTACCC AGCTAGAGAT CTTCGCCGAC
AAGTTCTTAG CTAAGTGTAC CTTAGGGCAA ATGATCAGCC GTTACATGGT TCTGGTTGCC
AGCGAACAGA AGCTATTGAT GATGCGCCCG TACCAAATTT ATGCGGTCAA GGCTATCGTC
GAGTGCATTC ATCAGAATTG CGGAAACGGC TACATCTGGC ATACCACTGG TTCGGGCAAG
ACGCTGACTT CGTTCAAAGC GTCCACTTTG CTCAAAGATA ATCCTGACAT CGAAAAATGC
CTTTTTGTGG TGGATCGTAA AGATCTGGAT CGCCAGACCC GCGAAGAATT TAACCGTTTT
CAGGAAGGCT GTGTAGAAGA GAACACTAAC ACTGAAACAC TGGTTCGCCG ACTTTTGTCT
GACGACTATG CCGATAAGGT TATTGTCACG ACTATCCAGA AGCTGGGCCT TGCCCTAGAC
GGCACAAATA AACGTAACTA CAAAGAACGT CTGGAGCCGT TACGAAACGC CCGTATCGTG
TTCATCTTCG ATGAATGCCA CCGCTCGCAA TTTGGTGAGA ACCATAAGGC TATAAAAGAA
TTTTTCCCCA ATGCCCAGCT TTTTGGCTTC ACGGGGACGC CTATCTTCGA GCAGAATGCC
AGCTACCAGC AAATCGAAGG TCAGCAAGCC AGCCTGCGTA CCACCGACGA CTTATTCGAA
CGGTGTTTGC ACCAGTACAC CATTACTCAT GCTATCGAAG ATCGCAACGT CTTACGCTTT
CACATAGACT ATTTCAAACC CGAAGGAAAG AACCCACCTA AGCCCGGTGA AGGCATCGCT
AAATCCAAGG TTATCGAAAC CATTCTTTCC AAGCACGATT CTGCGACCAA CGGACGCAAA
TTTAACGCTG TCCTGGCGAC AGCCAGCATT AACGATGCCA TCGAATATTT TGAGTTATTT
GCCAGTATTC AGACAAAAAA TGTAGAAAAA GACGCTGAAT TCCGGCCATT GAACGTAGCA
TGTGTTTTTT CCCCACCTTC TGAAGGTAAC AAAGACGTTC AGCAGATACA GGAAGATCTG
CCTCAGGAGA AAGAAGATAA CCAGCAAGAC CCGGAAGGCA AGAAAGCGGC ACTCACCCGT
ATCATTGCTG ATTACAATGC CCGTTTCGGG ACCAATCACC GCATAAGCGA ATTTGACTCT
TACTATCAGG ACGTACAAAA GCGCATCAAG GATCAGCAGT ACCCCAATAC AGACTTATCC
GCCGCGCAAA AAATTGACAT CACCATCGTA GTGGACATGC TGCTTACGGG ATTTGACTCC
AAGTACCTCA ATACGCTGTA CGTGGACAAA AATCTCAAAC ACCATGGCTT AATTCAGGCA
TTTTCACGTA CTAATCGCGT TCTCAACGAT ACGAAGCCCT ACGGCAACAT TCTCGATTTT
CGTCAGCAGC AAAAGTCGGT AGAAGGAGCC ATCGCGCTCT TTTCCGGTGA GAAAATCGAT
AACCCGCGTG AAATCTGGCT GGTAGACCCT GCACCTAAAG TCATAGAGAA TCTGCAAACA
GCCACGCAAA AACTGGCCGA CTTTATGCAA TCACAGGGGC TGAATAATGC ACCGGAAGAA
GTCGCTAACC TTAAAGGCGA TGTTGCCAGA GCGCAATTCG TTAACCTGTT CAAAGATGTT
CAGAGACTCA AAACTCAGCT CGATCAATAT ACCGATCTGT CTGAAGCGCA GAAGCAACAG
ATCGAGAGGA TCGTGCCGTC CGATCAATTG CAGGGATTTA AGGGCGTATA TCTGGAAACA
GCCAAACGCC TGAAAGAACA ACAGGACAAA GACCAGACAC CACCAGAAGT ACAACAACTC
GATTTTGAGT TTGTACTTTT TGCCTCTGCG GTTATTGATT ACGACTTTAT CATGGGTCTT
ATTGCTAATC TGACTCAGCA GAAACCAGGC AAGCTCACTC TGAATCGCGA AGAACTCATT
GGCCTGATCC AGTCCGATGC CAAGTTTATC GATGAGCGTG AAGATATTGC TGAGTACATC
CGTGGCCTGC CGGTAAATGA AGCATTAAAC GAAAAACAGA TTCGAACGGG TTTTGAACAC
TTTAAGGCAG AGAAGAAGGC GAAAGAGCTC AATGACATCG CCGCCCGACA TGAACTCGCA
CCTGATGCTT TACAGGTTTT TGTTGATGAA ATTCTACGTC GCCGTATCTT CGACGGCGAA
CGCCTTTCCG AATTAATGGC TCCGCTGAAT CTGGGCTGGA AAGCACGCAC GCAGAAAGAG
CTGGCGCTTA TGGATGAGCT GACACCGTTG TTACACAAAC TGGCACAAGG GCGTGAGATC
ACGGGACTAT CAGCCTATGA GGAAGGGAAA TAA
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| Protein sequence | MSTTENQIEL DLIARLAELK YTLRPDIRDR ASLEKNFREK FEALNKVHLT DSEFQRLLDT
IITPDVYNAA QKLRNINSFE RDDGTPLNYS LVNIRDWCKN DFEVVNQLRI NTDNSHHRYD
VILLINGVPV VQIELKTLSV SPRRAMQQIV DYKTEPGNGY GKTLLCFIQL FIVSNRTDTW
YFANNNARHF SFNADERFLP VYQFASEDNK KITQLEIFAD KFLAKCTLGQ MISRYMVLVA
SEQKLLMMRP YQIYAVKAIV ECIHQNCGNG YIWHTTGSGK TLTSFKASTL LKDNPDIEKC
LFVVDRKDLD RQTREEFNRF QEGCVEENTN TETLVRRLLS DDYADKVIVT TIQKLGLALD
GTNKRNYKER LEPLRNARIV FIFDECHRSQ FGENHKAIKE FFPNAQLFGF TGTPIFEQNA
SYQQIEGQQA SLRTTDDLFE RCLHQYTITH AIEDRNVLRF HIDYFKPEGK NPPKPGEGIA
KSKVIETILS KHDSATNGRK FNAVLATASI NDAIEYFELF ASIQTKNVEK DAEFRPLNVA
CVFSPPSEGN KDVQQIQEDL PQEKEDNQQD PEGKKAALTR IIADYNARFG TNHRISEFDS
YYQDVQKRIK DQQYPNTDLS AAQKIDITIV VDMLLTGFDS KYLNTLYVDK NLKHHGLIQA
FSRTNRVLND TKPYGNILDF RQQQKSVEGA IALFSGEKID NPREIWLVDP APKVIENLQT
ATQKLADFMQ SQGLNNAPEE VANLKGDVAR AQFVNLFKDV QRLKTQLDQY TDLSEAQKQQ
IERIVPSDQL QGFKGVYLET AKRLKEQQDK DQTPPEVQQL DFEFVLFASA VIDYDFIMGL
IANLTQQKPG KLTLNREELI GLIQSDAKFI DEREDIAEYI RGLPVNEALN EKQIRTGFEH
FKAEKKAKEL NDIAARHELA PDALQVFVDE ILRRRIFDGE RLSELMAPLN LGWKARTQKE
LALMDELTPL LHKLAQGREI TGLSAYEEGK
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