| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0736 |
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| Symbol | |
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| ID | 8119459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 847314 |
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| End bp | 848660 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644851123 |
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| Product | PTS system, lactose/cellobiose family IIC subunit |
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| Protein accession | YP_003003095 |
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| Protein GI | 251788374 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.67403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTCA AGGATCAGGC TATCGATTCA CTCGGATCGT TCGCCAACCA GTTCAACAGC
CTGAGATACA TCATGGCGAT CAAAGCCTCG TTCATCACGC TGATGCCGGT GATCATCGTG
GGCGCGTTCT CTGTGTTGAT CTCCAACATG GTGTTGGACC CGAAGAACGG GCTGGCGAGT
TTCGCTCTGT TTTCATTTCT GGCGCCGCTC AAACCCATCA TGAGCGGTAT TAACTACGCC
ACGCTGAACT TTCTCACTAT CGGCGCGGTG TTCCTGATCG GCATCGAGCT TGGGAAAATC
AATGGTTCCC GCAGCCTGTT TCCCGGCTTG TTGGCGGTGA TCTGTTTTAT TTCCATCACG
CCGACCACCA TCGATATGGT GATCAACGGC CAGACGCTGC CGGTGAAAGA CGTGCTGGCG
CGCCAGTTCT CCGACACCAA GAGCCTGTTC CTCGGCATGT TTATCGCCAT TGCGTCGGTG
GAAATCTACT CGAAGCTGGA ATCGGTAGAC CGGTTGCGCA TCAAGATGCC GGACAGCGTG
CCGCCGAATG TGTCCGCGTC GTTTTCGGCG TTGATCCCGG CGATCATCAC CGTGACGCTG
GTGGCGACCT TCGGCTTTAC CTTCCTGAAA GTGACCGGCA TGTCCCTGTA CGATGCCATC
TACAAAGTGG TGCAGCAGCC GCTGGAATCG GTGGTGCAGA GCCTGCCGGG GTTACTGATC
CTGATGTTTG TGGCGCAGCT GTTTTGGGTG ATCGGCATCC ACGGCAACCA GATGATCAAA
CCGATCCGCG AGCCGCTGCT GTTGGGGGCG ATTGCGGTGA ACATGACCGC GTTCGAGCAA
GGGCATGAAG TACCGAACAT CATCACTATG CCGTTCTGGG ATGTGTACAT GAGCATCGGC
GGGTCCGGGT TGACCATCGG CCTGCTGCTG GCGGTGATGA TCGCCTCCAA ACGCCGCGAG
ATGAAAGAGA TCGCCAAGAT CTCCTTCGGC CCCGGCGTGT TCAACATCAA TGAGCCGGTG
ATTTTCGGGA TGCCCATCAT GCTCAACCCG ATTCTGGCTA TTCCGTTCAT CATCACGCCG
CTGGTGACCG GCACCATCGG TTACTTCGCC ACCAGCATGG GCTTTGCCGG TAAAGCGGTG
GTGATGGTGC CCTGGACTAC GCCGCCGTTG ATTAACGCCT GGTTGTCCAC CGCCGGTTCG
ATGGGAGCGG TAGCGACGCA GTTGGTGTGT ATCGTCGTCG CCACCCTGAT TTATCTGCCG
TTCGTCAAAG TGGCGTCTCG CCGTGCCGAA CAGGCGCAGC GTGAAGCGGA GTCCGATGCA
GCCGCACAAG CCAATGCATT GAAATAA
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| Protein sequence | MSFKDQAIDS LGSFANQFNS LRYIMAIKAS FITLMPVIIV GAFSVLISNM VLDPKNGLAS
FALFSFLAPL KPIMSGINYA TLNFLTIGAV FLIGIELGKI NGSRSLFPGL LAVICFISIT
PTTIDMVING QTLPVKDVLA RQFSDTKSLF LGMFIAIASV EIYSKLESVD RLRIKMPDSV
PPNVSASFSA LIPAIITVTL VATFGFTFLK VTGMSLYDAI YKVVQQPLES VVQSLPGLLI
LMFVAQLFWV IGIHGNQMIK PIREPLLLGA IAVNMTAFEQ GHEVPNIITM PFWDVYMSIG
GSGLTIGLLL AVMIASKRRE MKEIAKISFG PGVFNINEPV IFGMPIMLNP ILAIPFIITP
LVTGTIGYFA TSMGFAGKAV VMVPWTTPPL INAWLSTAGS MGAVATQLVC IVVATLIYLP
FVKVASRRAE QAQREAESDA AAQANALK
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