| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0525 |
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| Symbol | |
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| ID | 8120261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 597474 |
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| End bp | 599405 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644850914 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_003002886 |
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| Protein GI | 251788165 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAAA TAGGGTATTG GCGATATGTG GCCGCCGTGC TGTGTCTCGT TGGAGCCTCC
TGCCAGGTGT TGGCAGATTC GCTGGATGAG CAGCGGCAAC GTTACCAGCA AATCAAGTCC
GCCTGGGATA ACAATCAGAT GGACGTGGTT TCGCAATTGA TGCCGACACT CCGTGATTAC
CCGCTTTATC CTTATCTGGA ATACCGTGCG TTGACGCAGG ATCTGTCGAC GCTCAGTGCC
GCTCAGGTCA GGCAGTTTAT CGCCGCACAC CCGACGCTGC CTGCTGTGCG TACGCTCAAT
AACAGCTTTA TCAATGAGCT GGCCCGCCGT CAGGATTGGA ATGGCTTGCT GGCCTTCAGT
CCGAACCAGC CAAAACCGGT CGCTTCACTC TGTAATTACT TGTACGCCAA AGTTATGGTC
GGGCAGTCGC AAGGCGTCTG GGAGCAGACG CGTGATATCT GGCTGACCGG TCGCTCTTTG
CCGCCTACCT GCGACAAGCT GTTTTCCAAT TGGCAGCAAC AAGGTGGGCA GACATCAATC
ATGGTGCTTG AGCGGATGAG GCTGGCGATG GATGCCGGCA GCGCAGGTCT GGTCAATCAT
CTCGCCAGAC AACTGCCGGC AGAGTACAGA ACCATCACCG ATGCGTTGCT GAAATTACAA
AGCAACCCTA AAACCATTGA GCGATTTGCC CGGTCGGTCG GCCCGACGGA TTTCACCCGC
AGGGCGGTAT TGTCGGCGTT TGGCCGTATT GCGCGTCAGG ACCCGGATGA GGCTCGTGCG
CTGTTGCCGC AGTTGGTTCG TCTGCAGAAA ATGCGCCCGC AGGAGCGCCA GAGTATGGAG
GAGGATGTCG TCTGGCGCAT GATGGGGAGC GATGTCACCG ATGAGCAGGC CCGCTGGCGC
GATGCGGTGA TTTTGCGTAG TACTTCCGCC CCACTGCTGG AGCGGCGTGT TCGTATGGCG
TTGGGGCAGG GAGATAAAGC CGGCCTGGCG CAATGGATAG CCCGACTGCC GGCCGATGTG
CAACAAAAGG ATGAGTGGCG CTACTGGCGA GCCAGCTTGT TGCTCGATCA GGGGCAACAG
CAAGAAGGTG AAAACCAATT GCGCGAGCTG ATGAAAATCC GTGGTTTTTA TCCGATGGCG
GCGGCGCAGA AGCTGAATGT CAATTATCCA TTGACGGTTG TTATTGCCGC TAAACCAGAG
CGAACGATTG GGCAGTTACC TGAGGTGGCG CGGGTACGCG AACTGATGTT CTGGGGCTTG
GAAAGTTTGG CTCGCTCTGA ATGGTCTGGC TTGGTCGCCA GCCGGGAACG GCCGCAACAG
GAAGCACTGG CGCGTTTTGC CTTTGAACAG CGTTGGTATG ATTTGAGTGT GCAGGCCACC
ATTGTGGCGA AGCTGTGGGA TAATCTCGAA GAGCGTTTCC CGCTGGCATG GAATGACGAT
TTCCGCCAGG CAACGCAAGG TAAAGGAATC AGCCAAAGTT ATGCGATGGC GATTGCGCGT
CAGGAAAGTG CCTGGAATCC ACAGGCGCGT TCTACTGTGG GCGCATCTGG GTTGATGCAA
CTCATGCCGG CTACCGCCCA GCATACCGCC GAGATGTTCA ACATCGCCAG TTATACCAAC
AGCAACCAAC TGCTGGACCC GCAGATGAAT ATCCAGATTG GCACCAGTTA TCTGGACTAT
GTTTATAATG CATTTGGTCA AAACCGTATT CTGGCGTCGG CCGCTTATAA CGCAGGGCCG
TCACGAGTGA GCAGTTGGCT GAAAGACAGC AACGGCCAGA TTGATGCCAT CGCGTTTGTG
GAAAGTATTC CGTTTTCCGA GACGCGCGGA TATGTTAAGA ACGTGCTGGC GTATGATGTT
TTTTACCGTA GTTTGATGCA GCAGCGTCAG ACAGCCCTGT TGATGGATAA CGAGTGGCGG
CGGCGTTACT AA
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| Protein sequence | MFKIGYWRYV AAVLCLVGAS CQVLADSLDE QRQRYQQIKS AWDNNQMDVV SQLMPTLRDY
PLYPYLEYRA LTQDLSTLSA AQVRQFIAAH PTLPAVRTLN NSFINELARR QDWNGLLAFS
PNQPKPVASL CNYLYAKVMV GQSQGVWEQT RDIWLTGRSL PPTCDKLFSN WQQQGGQTSI
MVLERMRLAM DAGSAGLVNH LARQLPAEYR TITDALLKLQ SNPKTIERFA RSVGPTDFTR
RAVLSAFGRI ARQDPDEARA LLPQLVRLQK MRPQERQSME EDVVWRMMGS DVTDEQARWR
DAVILRSTSA PLLERRVRMA LGQGDKAGLA QWIARLPADV QQKDEWRYWR ASLLLDQGQQ
QEGENQLREL MKIRGFYPMA AAQKLNVNYP LTVVIAAKPE RTIGQLPEVA RVRELMFWGL
ESLARSEWSG LVASRERPQQ EALARFAFEQ RWYDLSVQAT IVAKLWDNLE ERFPLAWNDD
FRQATQGKGI SQSYAMAIAR QESAWNPQAR STVGASGLMQ LMPATAQHTA EMFNIASYTN
SNQLLDPQMN IQIGTSYLDY VYNAFGQNRI LASAAYNAGP SRVSSWLKDS NGQIDAIAFV
ESIPFSETRG YVKNVLAYDV FYRSLMQQRQ TALLMDNEWR RRY
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