| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0420 |
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| Symbol | |
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| ID | 8118509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 483390 |
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| End bp | 487817 |
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| Gene Length | 4428 bp |
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| Protein Length | 1475 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644850814 |
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| Product | YD repeat protein |
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| Protein accession | YP_003002787 |
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| Protein GI | 251788066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACG ATATTCTGAG CCGGGTGGCC CGGGTAGGGG CCATGCATGC CGGAAACCGT
CCCAACCCGC CCGCCGACCG GCCGCAACCC TGTCAGGGTA AACCGCCAAC GTCGCCGGGC
AAGACCATCA AGCACAAGAG CTTCCTGGGT GCACTGGCGG GTGCCGTGGC CGGGGCGCTG
GTGGCGGCCG CCGTATTTAC CGCCGCTGCG GCCGTGGCGG GTGCTATCGC CGTTGCGGCG
ATTGGCACGG GTGGAATGGG GGCGGCGCTG GTGGTGGGGG TGGTAAAACT GGCCGCCGGA
TTTGGTGCGG TCAGCCTGCT GGGTGGGCTG ATAGACGCGG TGTCCAGCAA GGTGTCGGCG
ATGGTGGACA GCGGCTCGCC ATCGTTCGGA CCGGTGATGG CGGGCTCGGG TAACGTGTTT
GTCGAAAAAC AGCCGGTGGC CCGCGCCACG AAAGATACCG TCGCCTGCAC CCGGCACAAC
AGCCCGCAAC TGATTGCCCA GGGCAGCGAG TCGGTATTTG TGAACGACGC GCCAGCGGCC
CGTATCGACG ATAAAACCGT GTGTGGTGCC ACTATCAAGG AAGGGGCCTC GACGGTATTT
TTCGGCTCCG GGCAGGGCAC CTATCTGGAG ATTGCCGAAG AGTTTACCGC GCTGCAACGC
GCGCTGCTGA TTGCGGTGGA GTTTCTGGTG CCGCCCAGCC GCGGCATGTT CAGGGGGCTG
GGGAAACTGT TCACCCGTGG GCCGATGGCG GTACTAAAAG GGATGCGCGC CGGGGCGCTG
AAAACGCTGG AAGGACTGAA AAGCGCCGTT AAATGTGCCA GTGAGGGGTT TCGCAACAGC
AGGGGACTGT CGCGTGTCAC GGAAGCGGTG CGCGGTTTCC TCAAAGACCC GGTTTATATC
GCCAGCGGCG AGGTGATTGA ATCCCGTACC GATATCGCGC TGGGCCAGAC GCTGCCGCTG
GTGTTCGAAC GCACCTACCG CTCTGCCTCG GTACACACCG GGCTGCTGGG CCGCGGCTGG
CACGACAGTT GGAGCGAGGT GGCGACGGTA ACGCGCGACG GCCTCAACAC CCACGTGGTC
ATCACGCTGG CACAGGGCTA CGACATCGAT TTTACCTTCC ATCAGGACGT ACAGGCGGTG
TACTGCCCAC ACTACCCTGA ATTTACCCTG CACCGCCGGG GCGACGGCTT CAGCCTGTGG
CACCGCGACC AGCAGACCTG GCGCGACTTT AGCGTGGTGC AGGGCGAGCG CCGGTTGCTG
TCGGCCATTC ACGATAGCCA CGACAACCGC ATTGAACTGG TGCGCGACCC GAAAGGCTAC
CTGCGCCAGG TGCGCCACAG CGACGGCGTC ACCCTGCTGC TGGTGTGGCG GGGCGAGTAC
CTGCACCAGA TACAACGCAT CGACGGCGGC CAGAAGACGT TGCTGGCCGA GTACCGCCAG
GACGAACAGG GCCGACTGGT GGAAGCCAAC GCCACCCACG CCTATCACCT CTACTACGAG
TACGACGCCG CCCATCGGCT GACCCGCTGG CACGATAACG ACCAGACCTG GGCGCGCTAC
GAATACGATA CGCAGGGGCG CTGCGTCTAC ACCACCTGCG CCGACGGGTT TCTGACCGCC
CGCTTCGACT ACCTGCCCGA CCGGGTGGTG ATGACCGACG GCCTCGGCCA GCGCAGCGAA
TTCGGCTTTA ACGACCTGCA CCTGATGAGC TGGGAACAAT CCCCGCTCGG TCACGTCACC
CGCTACGAGT ACGACGAGGT CGGCAACCTG CTGCGGGAAA TCTCGCCCGC CGGGCGGGTG
GTCGAATTCG GCTATCTGGA CGACACCGGG CGGGTCAGCA CCTTTACCGA CGCCAGCGGG
CATCAGTGGC GGTACGACTA CGACGACGCG CTGCGGCTGT GCGGCGTCAC CGACCCGCTG
GGACGCGAGT GGCGCTGGGT GTATGACGCC GAGGGTAACC CGGAACGGCT CACCGGCCCG
GAAGCCAGCG AGGTACGATT CGCCTGGAAC CGCTACGGCC TGCTGACCCA GGTCAGCGAC
GCCGCCGGTG AGGTGCAGGC GCGGTTGCAG TACGACCACC GCCAGCGGCT GCTGAGCGCC
ACCGATGCCG AGAGCCGCAC CCAGCAAATG CGTTACGACA TGCAGGACCG GGTGGTACAG
TGGCAACGGG CGGATGGTGC CCGTTTCCGG CTCGGCTACC GCCGGGCCAG CTGGGCACTG
CCGGAGCAAC TGATACGCCC GGATGACAAG GAAGAGCAGC GCCAGTACGA CCGCCACAAC
AACCTGCTGA GCTACGTGGA CGGCAACGGC GCGCTGTGGC GTCAGAGCTT CGGCCCGTTC
GACCTGCTGA CCGCCCGCAC CGACGCCGAA GGCCACACCT GGCGCTACGC GTACGATAAA
GAGAGCCAGC AACTGACAAC GGTTATTGCC CCGGACGGCA GCCGCTGGCA GTGGTGGCTG
GACGCCGACG GGCGGGTCGT CCGCGAGCGT GACATGACCG GCACCGAGAC CCACTACGGC
TACGACGAGG ACGGCCTGTG CGTCAGCGTG CGCAACGGCG AAGGCGACAC CCGCCACTTC
CTCTACGACG CCCGCGGGCT GCTGTTGCGT GAAACCGCGC CGGACGACAC CCTGCACTAC
CGGTACGATG CGGTGGGCCG CCTGACCGAG GTCTCGTCGG CCACCGCCCA TGTGCAGCTG
GACTACGACC TGCGCGACCG GGTGGTGCGC GAATGGCACA ACGGCACGCT GCTTACCCGG
CAGGTTGATG ACAACGCCCG CACCGTCACC CGCACCCTGA CCTGGGACGG CGACGCCGGG
GACACCACCG GCACCCTCGC GCCGCTCACC AGTCTGTTCC ATTACACCCG CACCGGCGAG
CTGCGGCAGG TGCAGTTGCC GGACGGTGCC GACCTGACCC TGACCTATGA CGCGGCGGGC
CGCGAGTCAC ACCGCCGCGG CGGCAGCGGC TTTGTCCAGC AGCGGGAATA CGACGTGATG
GGCTGGCTGA CGCGGGAGAT GAGCGGGGCA CAGCACGACG GCCACCTGCT GGCGGCACAG
ACGCGGGAAT ACCGCTACGA CGGTGCCGGT AACCTGACCG GGGTGCGTCA CAACCGCGAC
GCCGAAGGTT ATCGTCTGGA CGCCACCGGC CGGGTGCAGG CAGTGCTGAG CGGCGGTGCG
GGCAAACCGG TGGACACCAC CGCCCGCTTC CACTACACCC GCACCGGTCT GCCGCAGGAG
GCAGGGCGGC TTACCGAGTG GCAGGCGGGC AGACTGGTTC AGCACGATGA CACCCATTAC
CAGTACGACA GGGCCGGACG GCTTATCCGT AAACAGGTGG TGCAGCCGGG CTACCGCCCG
CAGGTGTGGC AGTACCGCTG GGACAGCCGC AACCAGCTGC GGGTGGTGGA TACCCCGACC
GGCGAACGCT GGCTGTACCG TTACGACCCG TTCGGTCGCC GGGTGGGCAA ACGCTGCGAC
CAGAAAGCCG AAGAGACCCG CTACCAGTGG GACGGCGACC AGATAGCGGA AATCCGCCAC
TACCGCCACG GCCAGCTCGT GGCCCGCCGT CACTGGGTCT ACAACGGCTG GGAGCTGGTG
GTACAGCAGC GCCAGCACAC CGGCGGCGAC TGGGAAACGG ATTTTGTGAC CAGCAGCCAG
AACGGTACTC CACAGGCGCT GTTCACACCG GACGGCACCC TGCGCTGGCA GGCCCCGACA
GCCACCCTGT GGGGCCAGCG TCAGGCAGAA AAATCGGAAA GTCCGGACCC CGGCCTGGCC
TTCGCCGGGC AGCTCCGTGA CAGCGAAAGC GGGCTATGCT ATAACCGCTT TCGGTACTAC
GACCCGGCCG GTGGGTGTTA TGTCTCGCCA GACCCGATAG GGATAGCGGG GGGTGAGAAT
AACTATGGCT ACGTCCAGAA TCCCATGTGC TGGGTTGATC CGTTTGGGTT GGCTGGATGT
AGTTCATACC TTAATGCTTG GGGAGGGAGA AATGCCAAAG CATTTAAGAA TTTTTGGAAT
AACTCAAGTC ATGCTGATTT CATGAAAGCT TGGAATAATC CTGCTTTCAA AAAAAATATC
AAAGCTAGAC TACGAGGTGG CGGTTTAACT AACAGTGGTG GGTATCATGA ATGGCTTCCT
GTTTCACAGG GAGATAAATT TAAAAAAATG GGATTCTCTT TTGAGGAGTA TATGTCTTTG
ACCTCACCAA CCAATAAAGT TGGATTCTTA GACAAATTTG GGAATTACGG TTCTCACACC
AGCTACACAG GTGGTGTAAC AAAGGCATCA GCTCAAGCAC ATAGAGATCT GATCAATATG
GCCAAGTTGG CCCAAACAAA ATCTGGTTAT TTAGGGGCTG TCCAAAAATG GTCGGGGGAG
CATCTACCAT TTGGTCAGTT TGATTTGCCA TCAGGATTTT GGAAATAA
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| Protein sequence | MLNDILSRVA RVGAMHAGNR PNPPADRPQP CQGKPPTSPG KTIKHKSFLG ALAGAVAGAL
VAAAVFTAAA AVAGAIAVAA IGTGGMGAAL VVGVVKLAAG FGAVSLLGGL IDAVSSKVSA
MVDSGSPSFG PVMAGSGNVF VEKQPVARAT KDTVACTRHN SPQLIAQGSE SVFVNDAPAA
RIDDKTVCGA TIKEGASTVF FGSGQGTYLE IAEEFTALQR ALLIAVEFLV PPSRGMFRGL
GKLFTRGPMA VLKGMRAGAL KTLEGLKSAV KCASEGFRNS RGLSRVTEAV RGFLKDPVYI
ASGEVIESRT DIALGQTLPL VFERTYRSAS VHTGLLGRGW HDSWSEVATV TRDGLNTHVV
ITLAQGYDID FTFHQDVQAV YCPHYPEFTL HRRGDGFSLW HRDQQTWRDF SVVQGERRLL
SAIHDSHDNR IELVRDPKGY LRQVRHSDGV TLLLVWRGEY LHQIQRIDGG QKTLLAEYRQ
DEQGRLVEAN ATHAYHLYYE YDAAHRLTRW HDNDQTWARY EYDTQGRCVY TTCADGFLTA
RFDYLPDRVV MTDGLGQRSE FGFNDLHLMS WEQSPLGHVT RYEYDEVGNL LREISPAGRV
VEFGYLDDTG RVSTFTDASG HQWRYDYDDA LRLCGVTDPL GREWRWVYDA EGNPERLTGP
EASEVRFAWN RYGLLTQVSD AAGEVQARLQ YDHRQRLLSA TDAESRTQQM RYDMQDRVVQ
WQRADGARFR LGYRRASWAL PEQLIRPDDK EEQRQYDRHN NLLSYVDGNG ALWRQSFGPF
DLLTARTDAE GHTWRYAYDK ESQQLTTVIA PDGSRWQWWL DADGRVVRER DMTGTETHYG
YDEDGLCVSV RNGEGDTRHF LYDARGLLLR ETAPDDTLHY RYDAVGRLTE VSSATAHVQL
DYDLRDRVVR EWHNGTLLTR QVDDNARTVT RTLTWDGDAG DTTGTLAPLT SLFHYTRTGE
LRQVQLPDGA DLTLTYDAAG RESHRRGGSG FVQQREYDVM GWLTREMSGA QHDGHLLAAQ
TREYRYDGAG NLTGVRHNRD AEGYRLDATG RVQAVLSGGA GKPVDTTARF HYTRTGLPQE
AGRLTEWQAG RLVQHDDTHY QYDRAGRLIR KQVVQPGYRP QVWQYRWDSR NQLRVVDTPT
GERWLYRYDP FGRRVGKRCD QKAEETRYQW DGDQIAEIRH YRHGQLVARR HWVYNGWELV
VQQRQHTGGD WETDFVTSSQ NGTPQALFTP DGTLRWQAPT ATLWGQRQAE KSESPDPGLA
FAGQLRDSES GLCYNRFRYY DPAGGCYVSP DPIGIAGGEN NYGYVQNPMC WVDPFGLAGC
SSYLNAWGGR NAKAFKNFWN NSSHADFMKA WNNPAFKKNI KARLRGGGLT NSGGYHEWLP
VSQGDKFKKM GFSFEEYMSL TSPTNKVGFL DKFGNYGSHT SYTGGVTKAS AQAHRDLINM
AKLAQTKSGY LGAVQKWSGE HLPFGQFDLP SGFWK
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