Gene Dbac_3489 details

Gene Information

• Locus tag: Dbac_3489
• ID: 8379194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 3938119
• End bp: 3938733
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 645002730
• Product: ribosomal RNA methyltransferase RrmJ/FtsJ
• Protein accession: YP_003159977
• Protein GI: 256831249
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0293] 23S rRNA methylase
• TIGRFAM ID: [TIGR00438] cell division protein FtsJ

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAAT ACCGCGATTA CTATTTCAAA AAGGCCAAGC AGGACAATTA TCCTGCCCGC 
TCCGTATACA AGCTTCAGGA AATGGACAAG GCGCACAAGC TCTTGCGCCA GGGCCAGAAA 
GTGCTTGATC TCGGCGCCTG CCCCGGTTCC TGGACTCTTT ACGCCGCCGA ACGCGTCGGC 
GCGGAAGGCC GGGTGCTGGG TATCGACCTG AACATGCCGG ATACCCGTTT TCCGGAACAG 
GTGACCTTTT TGCAGGAAGA CATCTTTGCC CGCACTCCTC TTTTTCTCGG GCACCTGCAG 
GCGCTTGCCC CTTTCGACGT AGTCATGAGC GACATGGCCC CGAAGACCAC GGGCTCCAAA 
TTCACCGATC AGGCCCGCTC CATCCAACTG GTGGAGGCGG CCTTTGGCGT GGCCGAGGAA 
TGGCTGGCTT CCGGCGGCAC GTTCATCGCC AAGGTCTTCG AAGGTCCGGA TGTGCAGCCT 
TTTGTGCAGT CTCTTAAAGT CCGTTTCGCC AAGGTCGGCA TGTTCAAGCC CAAGAGCAGC 
CGGGCGGAGA GCAAGGAAAT ATTCATCCTG GGTTTGGGTT TTGTTCCCGC GGCCAGCGAG 
GCCCCGCCCG CATAA 

 

Protein sequence

MKQYRDYYFK KAKQDNYPAR SVYKLQEMDK AHKLLRQGQK VLDLGACPGS WTLYAAERVG 
AEGRVLGIDL NMPDTRFPEQ VTFLQEDIFA RTPLFLGHLQ ALAPFDVVMS DMAPKTTGSK 
FTDQARSIQL VEAAFGVAEE WLASGGTFIA KVFEGPDVQP FVQSLKVRFA KVGMFKPKSS 
RAESKEIFIL GLGFVPAASE APPA