| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3429 |
|---|
| Symbol | |
|---|
| ID | 8379130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3868945 |
|---|
| End bp | 3869868 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645002666 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003159917 |
|---|
| Protein GI | 256831189 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4966] Tfp pilus assembly protein PilW |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTACAGTG ACAGAGCCCA CTTAAATCAT GCTGGACATG CCGGCTTTTC GCTTGTCGAA
TTGCTGGTCG TAATCGTCAT GTTTGGAATT CTTACAACAG CTGGTTATAG CCTGTTTCGT
GAGCAAACAA GAATAAATCA AGCACAACAA AACCAACTGG AAATGCAAAG CAGCGCCAGA
GCTGCAATGC AGGTTTTAAT ACAGGCTTTC AGCCATGCTG GATTTGGGTG CAGCGAAAAA
ATTTCCGGAA CGAACGAAAT AGCTGGAGAA GACACATTTT TAATACACAC AGATCAAAAT
TTTTCGGGCA CAACGTCAGA CCGCGTCACA CTGATCTATG GATTTGAGCA CGTAGCAACA
ACAACAGCAC CCATTACCGA GACAAACGTA ATTCCAGTAG ATAATTCAAC TGATATCGGA
ACAGCCAACT TTTCAAAATA TATAAGCTTT TATCCATCAC TGACTCCAAA TTCATTCTAC
ACTGTCACAG CAAAAGGACT AAACAGTGTG ACTATCGATA GCAGTCTTTC TTCGCTACGA
GATAACTCGA AAGTTTTCCG GGTAAATCCC GTTGAATTTT ACGTGAACGG CGATGAACTC
CGACAGCGCT TTGTTGAACA CCCCACAGGC CTGGAAGAAG TTTTGATCTA TGATGTACAG
GATTTTCAAC TCGCATACAC TGAGGACGAT GAAAACCTAG GAATTCTGGC AAACTGGGAA
GACGATCCAG GAAACCCGGA GAACGTCAAG GCTGTATGGA TTTACATGAT TCTGCGCACT
CGAGAAATCG AACCAGGCCA TCAGGAAACC CGCACCTTCA GGTTACCATG GGACCCTGGT
CAAACTTTCG AGGGATCAAC TCTGCCGGCA GGATTCCACT ATCAGGAATT TCAAACACAG
GTCTGGTTGC GCAATGTTAA TTAA
|
|---|
| Protein sequence | MYSDRAHLNH AGHAGFSLVE LLVVIVMFGI LTTAGYSLFR EQTRINQAQQ NQLEMQSSAR
AAMQVLIQAF SHAGFGCSEK ISGTNEIAGE DTFLIHTDQN FSGTTSDRVT LIYGFEHVAT
TTAPITETNV IPVDNSTDIG TANFSKYISF YPSLTPNSFY TVTAKGLNSV TIDSSLSSLR
DNSKVFRVNP VEFYVNGDEL RQRFVEHPTG LEEVLIYDVQ DFQLAYTEDD ENLGILANWE
DDPGNPENVK AVWIYMILRT REIEPGHQET RTFRLPWDPG QTFEGSTLPA GFHYQEFQTQ
VWLRNVN
|
|---|
| |