| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3295 |
|---|
| Symbol | |
|---|
| ID | 8378991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3729707 |
|---|
| End bp | 3730903 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645002528 |
|---|
| Product | O-antigen polymerase |
|---|
| Protein accession | YP_003159783 |
|---|
| Protein GI | 256831055 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA AAGTGCAACT TGAAAAAATA TTTCTTTTTG CGCTATGTGG CATGTTTGTG
GCGTTTGGCA TAAACATCGG CGCGTATGCC TTTCTCTATT CAAGCGGGGT GCTTGGCGCA
GTGCTGCTCG TCCGGGAATA CGTTCGCGGA AACATCACTG TAAGCTGGAA ATTTTTCATC
CCGATCGTAT TTTTCGCATA CGTTGCCATC ACTCCGGGTC ATTTGTTCAA GGATCTGCCC
ATCGCCGACA TGTTCAGCGC GGCATTTTTC GCGGGAGCGG CTGGATGCTA TTTCTTCAAG
GACAAGATGC CTTCCATCTT GTTCTTGCTC CCCCTGGCCC TGTCCGCCCA TTTCCTTGCA
AGAGTGGTCG CAAGCCTGGC TTTTGACTAT CCACTGATCG AAACCACCGG CTACGTAGGC
AGCCTCACCT TGTCCTATTC GCATCACAAC GTTGTCGGAG TGCTCGCGTC TTTCGGCATC
TTCTCTCTGA TATCCTTCCC GCATCCACAG CCCACCATTC GTCGCATCGG GTACGCTCTG
ATGGCGATTT TGGGCATTGC TATCTTGTTG ACGGTAGGAC GATCAACCTA TCTGGGGCTT
GCGGCGGCCC TTGGGCTGTT TGCCCTGCTC AGGTCGTGGA AATTAGCGGT GGGGGGTATG
GTTGTAGCCA TCGCCGTTGG TGCAATGGCC CTGCCCTTTA TGGCGCCAGA TGCGCAAAAA
AGAATCACGG GCATGGTGCT CGCCCCGCAC AAGGAGCCAA ACTTTCAAAA CAGGTTGCCA
ACCTGGTCTA TCGGCATTGC AGGATTTAAA GAATCACCAC TGTTTGGAAA CGGTCTACGA
ACGTTCGAAA CGTACAGCAG ATCCTATTTA GACAAACACT ATTTAGAAAT TAAGAAAAAT
AATCCATATG CCCTAGATAA AGCGTTTGCA CATCCTCATA ATTCTTATAT TGCAATCATA
TATGGATGGG GAATAGTAGG ATTTATTTTT ATTTTTCTAA TTTTAGCATT ATCTCTATCA
ACCACGAAGA AAGAAAATAA GCTTTTGATA CTCTACTGCA CAACTTTTAT ACTCGCATTT
GGATTATTTG ATGTCCGCTT TCTAAGTAGA GATGGCGCTT TGTTTTTCTT GTTTCCAATC
GGAATGGCGG TTATCAATTC AAATGCAATT TTGATTAATT CATTAAAAAT GAAATAA
|
|---|
| Protein sequence | MSEKVQLEKI FLFALCGMFV AFGINIGAYA FLYSSGVLGA VLLVREYVRG NITVSWKFFI
PIVFFAYVAI TPGHLFKDLP IADMFSAAFF AGAAGCYFFK DKMPSILFLL PLALSAHFLA
RVVASLAFDY PLIETTGYVG SLTLSYSHHN VVGVLASFGI FSLISFPHPQ PTIRRIGYAL
MAILGIAILL TVGRSTYLGL AAALGLFALL RSWKLAVGGM VVAIAVGAMA LPFMAPDAQK
RITGMVLAPH KEPNFQNRLP TWSIGIAGFK ESPLFGNGLR TFETYSRSYL DKHYLEIKKN
NPYALDKAFA HPHNSYIAII YGWGIVGFIF IFLILALSLS TTKKENKLLI LYCTTFILAF
GLFDVRFLSR DGALFFLFPI GMAVINSNAI LINSLKMK
|
|---|
| |