Gene Dbac_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3061 
Symbol 
ID8378756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3463113 
End bp3464435 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content61% 
IMG OID645002296 
ProductMalate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) 
Protein accessionYP_003159552 
Protein GI256830824 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTTT TCACGCCCCA GGAAGCCCTA GATTATCATT CCGAAGTCCG TCCCGGCAAA 
GTCGAAGTCG TGCCGGTCAA GCCCTATTCC ACCCAGAAGC ATCTGACCAT GGCCTACAGC
CCGGGCGTGG CCGAATCCTG CCTGGCCATC GCCAAGGATC CGGACCTGAC CTACAAGTAC
ACGGGCCGCG GAAACCTCGT CGCCGTCGTG TCCAACGGCA CGGCCGTGCT GGGTCTGGGC
AACATCGGCG CCTATGCGGG CAAGCCGGTT ATGGAGGGCA AGGGGCTCCT CTTCAAGATT
TTCGCGGATG TGGATGTTTA CGACATCAAC CTCGACGTGA CCGACCCGGA CAAGCTCTGC
GAGATCGTCA AGGCCATGGA GCCGACCTTC GGCGGCATCA ACCTCGAAGA CATCAAGGCC
CCGGAGTGCT TTTACATCGA GGACAAGCTC AAAAAAGAAA TGAACATCCC GGTCTTCCAT
GACGACCAGC ACGGCACGGC CATCATCTCC GCCGCCGGTC TGATCAATGC GCTGGAAATC
ACGGGCAAGA AGATCGAGGA CCTGCGCATT GTCGTCTCCG GCGCGGGCGC GGCGGCCATT
TCCTGCACCC GGCTCTATGT TGCCCTGGGC GTGAAGCTCG AAAACGTCGC CATGTTCGAC
TCTCGCGGGC ACATGCACGC CGGTCGCACG GACTTGAATC CGCAGAAGCG CGAGTTCGCC
ACGGAAAAAG CCTACGGCTC ACTGGCCGAA GCCATGGTCG GCGCGGACAT GTTTCTGGGC
CTGTCCAAGG GGGGCGTGGT CAGTCAGGAC ATGGTCCGGA GCATGGGCAA AAACCCGATC
ATCTTCGCCT GCGCCAATCC GGTTCCCGAA ATCTCCTACA CCGAGGCCAA GGAAGCCCGT
CCCGACGCCA TCATGGGCAC GGGCCGCTCG GACTTCCCGA ACCAGATCAA CAACGTGCTC
GGCTTCCCCT TCATCTTCCG CGGGGCACTC GACGTCATGG CCTCGAACAT CAACGAGGAA
ATGAAATTGG CGGCAGCCAA GGCCCTGGCA GCTCTGGCCA AGGAGCCGGT GCCGGACTAC
GTGGTCGAGG CGTATGGCGT GGACAAGCTT GAATTCGGCA TCGACTACAT CATCCCCAAA
CCCGTGGACC TGCGCCTTAT CGAGTTCGAA TCCGCCGCCG TGGCCCAGGC CGCCATGGAC
ACGGGCGTGG CCCGCAAGCC CATCGCGGAC ATGGACGCCT ACCGCGTGTC CTTGCGCGAA
CGCATCGCCA AATCGCGCGA ACGACTGGAC GCCTTCGTGA AGACCTATCC GCAGATTTTC
TAG
 
Protein sequence
MALFTPQEAL DYHSEVRPGK VEVVPVKPYS TQKHLTMAYS PGVAESCLAI AKDPDLTYKY 
TGRGNLVAVV SNGTAVLGLG NIGAYAGKPV MEGKGLLFKI FADVDVYDIN LDVTDPDKLC
EIVKAMEPTF GGINLEDIKA PECFYIEDKL KKEMNIPVFH DDQHGTAIIS AAGLINALEI
TGKKIEDLRI VVSGAGAAAI SCTRLYVALG VKLENVAMFD SRGHMHAGRT DLNPQKREFA
TEKAYGSLAE AMVGADMFLG LSKGGVVSQD MVRSMGKNPI IFACANPVPE ISYTEAKEAR
PDAIMGTGRS DFPNQINNVL GFPFIFRGAL DVMASNINEE MKLAAAKALA ALAKEPVPDY
VVEAYGVDKL EFGIDYIIPK PVDLRLIEFE SAAVAQAAMD TGVARKPIAD MDAYRVSLRE
RIAKSRERLD AFVKTYPQIF