Gene Dbac_3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3043 
Symbol 
ID8378738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3440005 
End bp3441015 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content56% 
IMG OID645002278 
ProductPfkB domain protein 
Protein accessionYP_003159534 
Protein GI256830806 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR02198] rfaE bifunctional protein, domain I 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGG CGTTCAATGC CTCGCGCATG ATCGGCTCCA AGGTGCTTAT CATCGGAGAC 
ATCATGCTCG ACCAGTACCA AAAAGGGCTG GTTGAAAGAA TCTCTCCCGA AGCGCCCGTG
CCCGTCGTCA AGATCACCGA GCAGGTCTTC AAGATCGGCG GCGCCGGCAA TGTGGCCCAA
AACGTGGCCA CGCTGGGCGG ATGCCCGACC CTTGTGAGCA TGTGCGGAAA AGACCTTTAC
GGAGAAAATT TGCAGGAAAT CTGCAGCTCC CTCGGCATCG AAAGCCACCT CATCCGTTCC
GTTTCACGGG AAACGACCCT GAAGACACGG ATCATGGCCC AGCACCAGCA GATGCTGCGC
GTGGACAGGG AAACGGACCG CCCCCTTGAT GCAAAAGAAT TTTCGACCCT TCTGGAGACG
GTGGAGAGCA GGCTCGACAG CTTTGAGATC ATCATCCTCT CTGACTACGG CAAAGGGGTT
ATTTCGGAAG AATTTTTACG TTGGATGAAA GAGAAGAAAA GACCGGATCA AAAAATTATC
CTGGATCCCA AAACATGCAA TTTTCCTCAT TACGACGAAT TGTATTGCAT GACGCCAAAC
AAGAAAGAAG CCGCAGAAGG CGCTGAAATG GCGATCACAA ACCGCGAAGA CATCCTCAAA
GCGGGTAAGA AGATCATGCA GGAGCGCAAC CTGCAAAGCC TGGTCATCAC CCTGGGGGCT
GAAGGTATGG CGGTATTCCT GCCCGGACAG GGGGTCTTCC ACCTGCCGAC CACAGCCAAG
AAGGTCTTCG ACGTGACCGG AGCCGGTGAT ACCGTCATCG CGGTCATCGC GCTTGGACTC
AGCTCCGGGC TCGACCTGCT CAGCTCCTGC ATACTGGCCA ATTGCGCAGC CGGGCTTGTG
GTCGGCCAGG TCGGTGCCGT CGGAATCACC CAGGAGGTGC TCACCGAGAC ATTGAGTTCC
TGGCCTTCGG CGCAGCAGGA AAAATGGTTC CCGCTCCCGG CGCTAGGGTA A
 
Protein sequence
MNLAFNASRM IGSKVLIIGD IMLDQYQKGL VERISPEAPV PVVKITEQVF KIGGAGNVAQ 
NVATLGGCPT LVSMCGKDLY GENLQEICSS LGIESHLIRS VSRETTLKTR IMAQHQQMLR
VDRETDRPLD AKEFSTLLET VESRLDSFEI IILSDYGKGV ISEEFLRWMK EKKRPDQKII
LDPKTCNFPH YDELYCMTPN KKEAAEGAEM AITNREDILK AGKKIMQERN LQSLVITLGA
EGMAVFLPGQ GVFHLPTTAK KVFDVTGAGD TVIAVIALGL SSGLDLLSSC ILANCAAGLV
VGQVGAVGIT QEVLTETLSS WPSAQQEKWF PLPALG