Gene Dbac_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3000 
Symbol 
ID8378695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3393945 
End bp3394337 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content60% 
IMG OID645002235 
Productprotein of unknown function UPF0047 
Protein accessionYP_003159491 
Protein GI256830763 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTCCA TTCAAATCAA GACCGGCTCC AGAGAGGCCA TGATCGACAT CACCGCCCGC 
CTGGAAGAAC TGCTGCGAAA CCAGGGAACA ACCACGGGAC TGATGACGAT CTACACCCCG
CACACGACCA CGGGACTGAC CATCAACGAA GGGGCCGATC CCGACGTCTG CCGGGACATT
CTGACCCATC TGCGGACCAT GATCCCGCAC CAGGCGGATT TTCGCCACGC CGAGGGCAAT
TCGGATGCGC ACATCAAAGC CACTCTCTTC GGCTCATCCG TGCAGGTCAT CGTGCACGAG
GGACGGCTGA TGCTGGGCAC ATGGCAGCGC ATCTTTCTAG GAGAATTCGA CGGTCCACGG
TCACGCACGG TCTGGGTCAA GATCCTGGGC TGA
 
Protein sequence
MHSIQIKTGS REAMIDITAR LEELLRNQGT TTGLMTIYTP HTTTGLTINE GADPDVCRDI 
LTHLRTMIPH QADFRHAEGN SDAHIKATLF GSSVQVIVHE GRLMLGTWQR IFLGEFDGPR
SRTVWVKILG