Gene Dbac_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2250 
Symbol 
ID8377925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp2592330 
End bp2592989 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content60% 
IMG OID645001472 
Producthypothetical protein 
Protein accessionYP_003158748 
Protein GI256830020 
COG category[S] Function unknown 
COG ID[COG3334] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.599567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGGA AGAACAACGA AAAGAGCAAA AAGAATTCGA CGAGACAGGC ACCCTCCGGC 
ACGGGCGCAC GCCTTACTAG ACTGGTCCAG GCCTGCATCG CCCTTGCAGC CGTCAAGCTG 
GTGGCCATCT GCCTGCTCTG GATTCCGTCC GCCGTCCCGG AAACCTCCTT GTTGCAACCC 
GTGATCATCC GCCCGGCCAT TGCCGCAAGT CTGGCGCAGG CCGAGGAGCC TGCGGCGACC 
TCCGCAAAAA CCCAGGACAA CGCCACCGAT CCCGATACGC AGACAGGCCA GCTCCAGGAC 
CTCAATGCGC GTGAACAGGC CCTGGCCAAA AAGGAAGCGG AACTGAAGGC GCTTGAAGCG 
CAAGTCGATG AAAAGCTCAC AACATTGCGG GAGCTTGAAA TCAGGATGCA AAACCTGATC 
GATTCCGCCG GAAGCATCCA GGACGAAAAA ATGGCGCATC TCATCGATGT CTATTCGAAC 
ATGAAACCCA AGCAGGCCGC ATTGGTCCTG CAGACCCTGG AAGAACCCAT CGCCGTCAGA 
ATCCTGGCGG GGATGAGCGG CCGCAAGGCC GGCGAGATCC TTTCATCGGT GCGGCCCGAC 
CGTGCGGCCG CGCTCTCCGC AGCCCTGACC CGGCTGCAGA CCGGCGAAAG CGGGAATTAG
 
Protein sequence
MVRKNNEKSK KNSTRQAPSG TGARLTRLVQ ACIALAAVKL VAICLLWIPS AVPETSLLQP 
VIIRPAIAAS LAQAEEPAAT SAKTQDNATD PDTQTGQLQD LNAREQALAK KEAELKALEA 
QVDEKLTTLR ELEIRMQNLI DSAGSIQDEK MAHLIDVYSN MKPKQAALVL QTLEEPIAVR 
ILAGMSGRKA GEILSSVRPD RAAALSAALT RLQTGESGN