Gene Dbac_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2233 
Symbol 
ID8377907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp2574905 
End bp2575591 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content60% 
IMG OID645001454 
ProductCAAX prenyl protease-related protein 
Protein accessionYP_003158731 
Protein GI256830003 
COG category 
COG ID 
TIGRFAM ID[TIGR03008] CAAX prenyl protease-related protein 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000816871 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACA ACGCCTGGCC GCGCATATTG CCTTTTGCCC TCTTCATGGC CGTCATCGGT 
CTAGAGGAAG GATTGCGTTT CATGGATGAC AAAGCCTGGG TCAGCATCCA GGACTCCACC 
TTCGCCCTGC TTTATCCGCT GAGACCCCTG GTTGCCGGCA TCGCACTCAT CCTGTGCCGC 
CGGGCCTACA CGGAACTGCG GTGGTCCGAC CTGGCCCGGA GCAGCCAGAC AGTGATGAGT 
ATCGCGCTGG GGCTTGTGGT CTTTGCGCTG TGGGTCAACA TGGACTGGAC TATCGGCGCG 
CTGAGCGAGC CGCCGGGCTT CAATCCGGGC ATCTTTCCGG ACCCCGGCCT GCGCCGGGTC 
ATGACCGTCA TCCGCATCGG CAGCGCCGTG CTCGTTGTCC CGATCATGGA GGAAATCTTC 
TGGCGTTCCT TCATTCTGCG CTACGTCATC AATCCGGATT TCGCCAAAGT CCCGCTCGGT 
ACGTTCACCT GGATTTCGTT TCTGGTCGGA GCCGTGCTCT TCGGCTTGGC CCACCATTTC 
ATCCTAGCCG GAATCATGGC CGGCATGGCC TATTCCTGGT TGCTCTACAG AACCAGGAGT 
CTGGCGCAAT GCGTCCTGTC CCACGCAGTG ACCAATCTGG CCCTGGCCGC CTTTGTGCTG 
AACACGGAAA AATGGTGGTT TTGGTAA
 
Protein sequence
MNDNAWPRIL PFALFMAVIG LEEGLRFMDD KAWVSIQDST FALLYPLRPL VAGIALILCR 
RAYTELRWSD LARSSQTVMS IALGLVVFAL WVNMDWTIGA LSEPPGFNPG IFPDPGLRRV 
MTVIRIGSAV LVVPIMEEIF WRSFILRYVI NPDFAKVPLG TFTWISFLVG AVLFGLAHHF 
ILAGIMAGMA YSWLLYRTRS LAQCVLSHAV TNLALAAFVL NTEKWWFW