| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2085 |
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| Symbol | |
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| ID | 8377760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2391207 |
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| End bp | 2393435 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645001309 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_003158586 |
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| Protein GI | 256829858 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0894928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGTA AGGAGTTGGA AAGAATCATT GGCAATGCTG TGCGCGAGGT CAAACTGCGC
CAGCACGAGT TTTTGACCCT CGAGCATCTG CTTTACAGCT ACACGCTCGA CACCCACGGT
CAAAGCCTGC TTGCCGGTTG CGGCATCGAT CTGGAGCGTC TGCGCAAGCA GCTGGCTCAA
TTTTTCATCG ATCATCTTGA TGTAAGCCCC CGTCCCGAGC ACGAGATCGT GCAGACGGTC
AGCGTGCAGC GGGCCATGCA GCGGGCCATC CTGCACATTC AGTCCTCGGG CAAGAACCAG
GTCGAGGCCG GTGATTTTCT GGCCGCCATG CTCGAAGAGG AGGACGCCTT TGCCGTCTAT
TACCTCAAGG CCCAAGGTCT GACACGGCTG GCGGTGATCG AGTACATTTC CCATCAGGTT
CCCGACGGGG CCGTGGCCGG CGAGGCCGAA ACCAGGGATG GCGGCAAGCA GAGCGCTCTG
GATAAATATA CGGTGGATCT GGTGGCCCGG GCGCTGGAAG GCAGGATCGA TCCCCTGGTC
GGCCGCGACG AGGAGCTCAA ACGCACCCTG CAGGTTCTGG CCCGGCGCAA GAAGAACAAT
CCCATCTTCG TCGGTGACCC CGGCGTAGGC AAGACCGCCG TGGCCGAGGG CCTGGCGCTC
AAGATCGCGC GCGGCGAGGT GCCGGAGCAG TTTGCCGAGG CTCGTATCTT CGCCTTGGAC
ATGGGCAGCC TCCTGGCCGG GACCAAGTAC CGTGGCGACT TCGAGGCCCG CCTCAAGGGC
GTCATCTCGG AGCTCAAATC CATGGACGGG GCCATCCTGT GCATCGACGA GATCCACACC
ATTGTCGGCG CGGGCTCGAC CAGCGGCGGG TCCATGGACG CCTCCAATAT CTTGAAGCCC
GTGCTGGCCT CGGGCGAACT GCGCTGCATC GGCTCCACCA CCTACGAGGA ATACAAGAAC
CATTTCGAGA AGGACCGCGC CCTGTCCCGG CGCTTCCAGA AAATCGACAT CGTCGAGCCC
TCCGTGGCCG AGAGCGAGAA GATCCTCATG GGCCTTCGGC CCTATTACGA GGATTTTCAC
GGGGTGAAGT ATCAGCCCTC GGCCATCTCC GCCGCCGTGG AGCTTTCCGC CCGGCACATC
AACGACCGTT TTTTGCCGGA CAAGGCCATC GACGTCATCG ACGAGGCCGG AGCCATCTTT
GTTCTCTCCG GGGAAAAGAA ACGGCGCAAG TCCGTGACCC GGCGCGACAT CGAGGAAGTG
GTGGCGCGCA TGGCGCGTAT TCCCAGTGCC CGCGTCAGCG CTTCGGACCG TGACCGTCTG
GCCGGCCTCG AATACGAGCT CGGCTCCAAG GTCTTCGGAC AGAAGGAGGC GGTGGCGCAA
CTGGCCCAGG CCATCAAGCG CTCCCGCGCG GGCCTTGGCA ACGCGGAGCG GCCCCTGGGC
TCCTTCCTGT TGAGCGGCCC CACGGGCGTG GGCAAGACCG AGCTGGCCAA GCAGTTGGCC
AGTTGCCTGG ATGTGGCCTT CGTGCGCTTC GACATGAGCG AGTACATGGA GAAGCACGCC
GTGGCCCGGC TCATCGGAGC GCCTCCCGGC TATGTCGGCT TCGAGCAGGG CGGCCTTTTG
ACCGACGCCA TCCGCAAGAC TCCGCACTGC GTGCTGCTCC TCGACGAAAT CGAGAAGGCG
CACATGGACA TGTTCTCCAT CCTGTTGCAG GTCATGGACC ATGCGACCCT GACGGACAAC
AACGGCCGCA AGTCCGATTT CCGCAACGTG ATCCTGCTCA TGACCTCCAA TGCGGGCGCC
CGCGAGATGA GCGGCAACGC CATCGGCTTC AAGGCCGGGG CCGAGGAGGA CAGAGGGCTG
CGCGGGCTGG CCGCCATCGA AAAGCTCTTC AGCCCGGAAT TCCGCAACCG GCTCGACGCC
ATCATTCCTT TCCATTCCCT GACCCAGGAC ATCATGGAAA AGATAGTGGA CAAGTTCATG
GGCGAACTGG GTGTCCAGCT CGCAGCCAAG AACGTGACTC TGGAGCTCTC GCCCGAGGCC
CGTGCCTGGC TGGCCAAAAA GGGCTTTGAC CCCGCGTTCG GGGCCAGACC GCTGGGGCGG
CTGATCCAGA AGGAAATCAA GGACGAACTG GCCGGCAGGA TTCTGTTCGG AGAACTCGCC
GGCGGCGGAA GCGTGCGTAT CGGATTGACG GAGAGCGGGA AGCTGGATTT CACCTTCTCC
CTCACGTGA
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| Protein sequence | MLSKELERII GNAVREVKLR QHEFLTLEHL LYSYTLDTHG QSLLAGCGID LERLRKQLAQ
FFIDHLDVSP RPEHEIVQTV SVQRAMQRAI LHIQSSGKNQ VEAGDFLAAM LEEEDAFAVY
YLKAQGLTRL AVIEYISHQV PDGAVAGEAE TRDGGKQSAL DKYTVDLVAR ALEGRIDPLV
GRDEELKRTL QVLARRKKNN PIFVGDPGVG KTAVAEGLAL KIARGEVPEQ FAEARIFALD
MGSLLAGTKY RGDFEARLKG VISELKSMDG AILCIDEIHT IVGAGSTSGG SMDASNILKP
VLASGELRCI GSTTYEEYKN HFEKDRALSR RFQKIDIVEP SVAESEKILM GLRPYYEDFH
GVKYQPSAIS AAVELSARHI NDRFLPDKAI DVIDEAGAIF VLSGEKKRRK SVTRRDIEEV
VARMARIPSA RVSASDRDRL AGLEYELGSK VFGQKEAVAQ LAQAIKRSRA GLGNAERPLG
SFLLSGPTGV GKTELAKQLA SCLDVAFVRF DMSEYMEKHA VARLIGAPPG YVGFEQGGLL
TDAIRKTPHC VLLLDEIEKA HMDMFSILLQ VMDHATLTDN NGRKSDFRNV ILLMTSNAGA
REMSGNAIGF KAGAEEDRGL RGLAAIEKLF SPEFRNRLDA IIPFHSLTQD IMEKIVDKFM
GELGVQLAAK NVTLELSPEA RAWLAKKGFD PAFGARPLGR LIQKEIKDEL AGRILFGELA
GGGSVRIGLT ESGKLDFTFS LT
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