Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2019 |
Symbol | |
ID | 8377694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 2322008 |
End bp | 2323912 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645001244 |
Product | selenocysteine-specific translation elongation factor |
Protein accession | YP_003158521 |
Protein GI | 256829793 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00475] selenocysteine-specific elongation factor SelB [TIGR00485] translation elongation factor TU |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0284313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGTCA TCATGGGTAC GGCCGGACAT ATCGATCACG GCAAGACGAG CCTCATTAAG GCCTTGACCG GCATCAACTG CGACCGGTTG GCCGAGGAGC AGAAGCGCGG CATCACCATC GAGCTGGGTT TCGCCTACCT GGACCTGACC CCGCAGATTC GCCTCGGCAT CATCGACGTG CCCGGGCACG AGCGCTTCGT GAAGAACATG GTCTCCGGAG CGGCTGGCAT TGACTTCGTG CTGCTGGTGG TTGCCGCCGA CGAGGGCATC ATGCCTCAGA CCCGCGAGCA TCTGGAGATC TGTTCGCTCT TGGGTATCAG GGCCGGGCTG GTGACTCTGA CCAAGACCGA CATGGTCGAG GAGGAGTGGC TTGAGTTGGT GCATGAGGAA GTGCAGGCTT ATCTGGCCGG ATCGTTTCTG GAGGGCGCGC CCATTGTCCC GGTTTCGGCC CACACGGGCG CGGGACTGGA AGAGCTGAAA GGCCACATCG CCGAACTGTC CTCGACTTTT GCCCCTGACC GGCGTTCGGA CCTGTTTCGT CTGCCCGTTG ACCGCGTCTT CACCATGAAA GGGCATGGCA CGGTCGTCAC GGGCACGTCC ATTTCCGGAG CCCTGCGCCT GGGTGAGGAG ATCGAGATTG TCCCGTCCGG ACACCGCTCT AAGGTACGCG GCCTGCAAGT GCATGGCACG GCCGCCGAAA CGGCCCACGC CGGCGAGCGT ACCGCCGTCA ACCTGTATGG CCTGGAGGTG GCGGAGCTTG AGCGCGGCGA GGTGCTGGCC CATCCCCAGA CCCTTTTTCC CTCCCCGGTC TGGGACGTGG AAATGATGTG TCTGTCATCC TCGCCCAACC CCCTGAAACA CCGCACGGAA GTTCATTTTC ACCACGGCTC GCGCGAGATT TTGGCCAAGC TCTTTTTTCT CGACCGCGAC AAGCTCGAAC CGGGCGAGAC AGCGGTCTGC CAGGTCCGCT TTCCGCGACC CCTGCCGGGC GTATTCGGGG ACCGCTGCAT CGTGCGCTCC TTTTCGCCCC TGCAGACCGT GGCCGGCGGC CGGATCATCA ACCCGCTGGG CCGCAAGGTT CGCCGCCACT CCAAGGACAT GGAGACCTTA AGCACCCTGG GGTCCATATC CGGCGAGGAG CTTCTGCTGG CACAGCTGCG CCTGGCCGGG CGCGGCGGCC TGACCGTGGC CGAACTGCGC ATCATGACGG ACATGGAGTC CAAGCTTCTC GACAAGACCC TGCAGATCCT GGGCGGGAAG CAATTGGCCT TCCAGTTCGA CCGCGAGGAC AGGCGCTTTG TCGGCGCGGA CGTGCTCGAC GGCCTGGCCG GAGACTGTTT GGCCTACCTT GGCGACTATC ATCGCCGCGA ACCCATGCGT CAGGGATTGT CGCGGGCTGA GCTGATTTCG GGATTCGGAC GGGGCATGCA CCCCAAGCTG GTGCACTTCC TGGTTGAGCG GCTGGTCAAA TCCGGCCAGG TGGTGCTCGA AGCCGACATC CTGCGACTGC CGGGACATGT GGTTTCCCTG GCCTCGGATC AGTCGGGATT GCGTACGCTG ATGGAGACGG CCTATGTGCA AGCGAGATTC ATGCCGCCCA CCACCAAGGC GTTTCTGGAG GAAAACGGGC TGACAGCCAA GGATGTGGCG CAGATGTACC GGCTGCTGAT GGAAGAGGGC GTGCTCATCA AGATCAGCGA GGAGTTTTAT TACGCCAAAA CGGCCATGGA CGAGATTGTC GCCCGCGTGC GGGGCTTCTT CGGGTCCAAT CAGGAGATGG GCCCCCAGGA CTTTCGCGAT CTGACGGACC TGACGCGCAA GTTTGCCATC CCGGTGCTCG AATATCTGGA CAAGGAAAAG ATCACTATGC GTATTGGAGA TAAGAGGCAG ATTCGGAAGC GTTAA
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Protein sequence | MPVIMGTAGH IDHGKTSLIK ALTGINCDRL AEEQKRGITI ELGFAYLDLT PQIRLGIIDV PGHERFVKNM VSGAAGIDFV LLVVAADEGI MPQTREHLEI CSLLGIRAGL VTLTKTDMVE EEWLELVHEE VQAYLAGSFL EGAPIVPVSA HTGAGLEELK GHIAELSSTF APDRRSDLFR LPVDRVFTMK GHGTVVTGTS ISGALRLGEE IEIVPSGHRS KVRGLQVHGT AAETAHAGER TAVNLYGLEV AELERGEVLA HPQTLFPSPV WDVEMMCLSS SPNPLKHRTE VHFHHGSREI LAKLFFLDRD KLEPGETAVC QVRFPRPLPG VFGDRCIVRS FSPLQTVAGG RIINPLGRKV RRHSKDMETL STLGSISGEE LLLAQLRLAG RGGLTVAELR IMTDMESKLL DKTLQILGGK QLAFQFDRED RRFVGADVLD GLAGDCLAYL GDYHRREPMR QGLSRAELIS GFGRGMHPKL VHFLVERLVK SGQVVLEADI LRLPGHVVSL ASDQSGLRTL METAYVQARF MPPTTKAFLE ENGLTAKDVA QMYRLLMEEG VLIKISEEFY YAKTAMDEIV ARVRGFFGSN QEMGPQDFRD LTDLTRKFAI PVLEYLDKEK ITMRIGDKRQ IRKR
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