Gene Dbac_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1962 
Symbol 
ID8377635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2256491 
End bp2257462 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content59% 
IMG OID645001187 
ProductNa+/Ca+ antiporter, CaCA family 
Protein accessionYP_003158466 
Protein GI256829738 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATCC CTTTTCTCGC TCTTTGTGCC GGTTTGGCCC TGCTTGTCTG GAGTGCGGAC 
CATTTCATCG ACGGCGCGGC CAGCGTCGCG CGCCATTTTT CCATGCCCCC GCTACTCATC
GGCATGATCA TTGTCGGCTT CGGGACGTCA GCCCCGGAAA TGGTCGTCTC CGCGCTGGCC
GCCATGAACG GCACACCCGG CATTGCTCTG GGCAATGCTT TCGGTTCGAA TATCACTAAC
ATAGCTCTCA TCCTCGGCTT CACCGCCCTG CTCAAACCCA TCGAGATCCA TTCCCAGGTG
CTGCGCAAGG AATTGCCGTT GCTCACAGCG GTGACCGCAG TGACGGCATA CCTTATTCAC
GAAGGAACCC TCACCCGCAC TGATGCCGTG ATCATGCTGG TTCTTTTTGC CGGGCTCATG
TTCTGGACCG TGCGACAGGG AATGCAAACC CAGGGAGACC CCTTTGGCGA AGAGATGGGC
AACGAATTAT GCGCGCAGTG CATGCCCCTC GGCCGCGCCT ACTTTTGGCT CGTCACAGGA
CTTGTTCTTC TCATCGGCAG CTCCCGCCTT TTGGTATGGG GCGCGGTGGA GATCGCGCAC
GCCCTCGGGG TGAGCGACCT CATCATAGGT CTGACCGTCG TCGCGCTGGG CACCTCGCTT
CCGGAGCTGG CGTCCTCGAT CATCGCCAGT CGCAAGGGCG AACATGATAT CGCGCTGGGC
AATGTGCTGG GCTCAAACCT TTTCAACACC TTGGCCGTGG TCGGAATCGC CGGCGTTATC
CGCCCCATGG ACGTTGAACC CGGAGTCATT TCACGTGACA TTCCGGTCAT GACCGCCCTT
ACCCTTTCCC TGTTCCTGAT CGGCTTCAGA TTCAAACGAC CCGGCCGCAT CAACCGCTAT
GCGGGCGCAG CCCTGCTGAC GTGCTATATC GGATACACTG CCTTTCTGGT CAGAACGACT
CTCTTCCCAT AA
 
Protein sequence
MLIPFLALCA GLALLVWSAD HFIDGAASVA RHFSMPPLLI GMIIVGFGTS APEMVVSALA 
AMNGTPGIAL GNAFGSNITN IALILGFTAL LKPIEIHSQV LRKELPLLTA VTAVTAYLIH
EGTLTRTDAV IMLVLFAGLM FWTVRQGMQT QGDPFGEEMG NELCAQCMPL GRAYFWLVTG
LVLLIGSSRL LVWGAVEIAH ALGVSDLIIG LTVVALGTSL PELASSIIAS RKGEHDIALG
NVLGSNLFNT LAVVGIAGVI RPMDVEPGVI SRDIPVMTAL TLSLFLIGFR FKRPGRINRY
AGAALLTCYI GYTAFLVRTT LFP