| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1916 |
|---|
| Symbol | |
|---|
| ID | 8377588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2207033 |
|---|
| End bp | 2208199 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645001143 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_003158422 |
|---|
| Protein GI | 256829694 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.631291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGA TGAACGGAAA TTCTCGCAGT CTCGGGTTTT TCTTTCCCGG CGCGGCCGTT
GTGGTTGTCT GTCTGACCCT TCTGGCCTCG TGCGAGGGTC AAAAGGAGGT GCAGGAGGCG
TCCGCGGAGC CCCGGCCCGT GAAGATGATG ACCGTCGGAC AGGCTTCGCA AGCCACGCAA
CGCTCGTTTC CGGGCACGGT GCGGGCGGCC AGGCGGGCGG AGTTGGCCTT TCAGGTTTCC
GGCACCCTCA TCCGGCTTCC CGTTGGGGAG GGGCAGGAGG TGCGGGAAGG GGACGTTCTG
GCACAGCTGG AGCAACGCGA TTTCGAGACC GGTCTGCGCA GCGCCCAGGG GCAGTACGGC
AATGTCCGCG CCGCTTTGGA GAGCGCCAAA AGCGAGTACG AGCGGATTCT GCGGATCCGC
AAACAGGATC CCGGCGCGAC CAGCGAGAGC ATGATCGTGA AAAGGCGCGA AGCCATGGAC
CGGGCCACGG CCGAGCTGGA GTCCGTCCAG GCAGCGGTGG ACGCGGCCAG GGACAAGCTT
GGCTACACCC GCCTGCACGC TCCTTTTTCC GGCATCGTCT CCAGGCGGCA TGTGGAAAAT
TTTCAGGAGG TGCAGGCCAA GGAGCCCGTC GTCAGCCTGG ACGACATCTC GTCCCTTGAA
ATTCTGGTCG ACCTGCCAGA GAGCGTGGTT GCGCGCATAA ACGAGCCTTC TGAAAGAACA
GGGAAGCAGG CTCCGGTGCA TGCGGAGTTC GCGGCCCTGC CGGGTCGGGA ATTTTCTCTC
ATCGTCAAGG AATTCTCCAC CAGGGCGGAC CCCAAAACCC AGACCTTCCA GGTCGTCTTC
CAGATGGAAA AGCCGGACGA TGTCGCCATC CTGCCGGGCA TGACCGCCAT GATCGTCGGC
TCCGCGCAGC AAGGCGTGAA CGGAGACGGC CGGTACGTCA TTCCCGCAGT GGCTGTTTTC
GGCGACGAGC AGGGCGTCTC CCATGTCTGG GTGGTGGAGC CGAAATCCAT GGCCGTGCAG
CGCCGCAAGG TCGGCATCGG CGAGGTGGCC GGGGATGCGG GCATCCGCAT AACCGAAGGC
CTGCAGGCCG GAGAGATTGT GGCGGTGAGC GGAGCCAGTC AGCTGCGTGA CGGGATGCGG
GTCAAGCCGT TTGATGGAAC CTTCTGA
|
|---|
| Protein sequence | MSRMNGNSRS LGFFFPGAAV VVVCLTLLAS CEGQKEVQEA SAEPRPVKMM TVGQASQATQ
RSFPGTVRAA RRAELAFQVS GTLIRLPVGE GQEVREGDVL AQLEQRDFET GLRSAQGQYG
NVRAALESAK SEYERILRIR KQDPGATSES MIVKRREAMD RATAELESVQ AAVDAARDKL
GYTRLHAPFS GIVSRRHVEN FQEVQAKEPV VSLDDISSLE ILVDLPESVV ARINEPSERT
GKQAPVHAEF AALPGREFSL IVKEFSTRAD PKTQTFQVVF QMEKPDDVAI LPGMTAMIVG
SAQQGVNGDG RYVIPAVAVF GDEQGVSHVW VVEPKSMAVQ RRKVGIGEVA GDAGIRITEG
LQAGEIVAVS GASQLRDGMR VKPFDGTF
|
|---|
| |