| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1892 |
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| Symbol | |
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| ID | 8377564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2184524 |
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| End bp | 2186455 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645001120 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003158399 |
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| Protein GI | 256829671 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTCA TCTCTCGCAT TCTTGTTTTC GTGTGCATGG CCGCCCTTGG CGTCATGATC
TCCGCTCCGT CCGAAGCTTT TGGCTCGGAA ATCAGGCGCC GGATTTATCT CCAGGCCGAG
GAGGCGCTGG GCAAGGGGCA GCGTCAGGAC TACCTGGCCA GGCGTGCCGA GCTCGGCGAC
TACGTGCTTC TGCCCTATCT GACGCAGCAG GATCTGGAAA AACGCATGGG GCTCGGCATC
TCCGGGGAAG TCCGTTCCTT TCTGCGCGAG CACGACGGCA CCCCGCCCGC CGAGGCGCTG
CGCAGGTCTT GGCTTGCCCT GCTTGCCAAA AATGCTCAGT GGAGCCGGTT TGTGGAAGAC
TATCGCCCGC AAAACGACGA AAATCTGCAA TGCTTTTACG GCCAGGCCCT GCTGGCCACG
GGCAGGCGGT CCGAGGCCAT GGACCAGGCC GCGTCACTGT GGCTTTCGGG TTCCTCGCGC
CCGAAATCCT GCGACCCCCT GTTCAACGCC TGGATCAAGG AAGGCGGATT GACCAGAGCC
TTGACCTGGC AGCGCATTGA GCTGGCCATG CAGCGGGGTC AGGCCAATCT GGCCCGCCAT
CTGTGGCGTC ATCTGGCCCC GGCCGATGCG CAGTGGCTCG ATTACTGGCT ACGGGTGGAC
CAGAACCCCG CCCTGATTCT GGAGCGTGAC TGGACCACGG TGACCCACGA CCGGATGGAC
GCCATACTCG CCCACGGCAT GCGTAAGATG ACGCGGGCCG ATGCGTCCCG TGCCGCTAAG
GAATGGGATG TTTTGCGGCG ACGCAATGGC CTGGACCGTG CGCGCTTTGC AGCCATTGAA
AACGATGCGG CTTTGTACAT GTGCTTGCGC TTTGAACCAG GCGCCGTGGC GCGGGTAGAG
TCCATCCCGC AAGACCTTCG CAGCGACTCC GTGCGCGAGT GGGCCGTGCG CGCGGCTCTG
CGCGAGCAGG ACTGGGGGGC GGCGCTCCAC ATGCTGGATG GGCTCAGCGT CACCCAGAAG
GAGGAACCGC GCTGGCGCTA TTGGCAGGGC CGCGCCCTGC AGGAGAATGG CCGGGACAGG
GAAGCGCTGG TAGTGTTTGA AACGCTGGCC GAGAGGCAGG ATTACTTCTC CATGCTGGCG
CTGGGGCATC TGGGCAGGCC CATGGTGGTG CCGCACATCC CGCTGGCCGT TACGGACGAT
GCTGTGCGCC GCGTCGGGAA GCTGCCCGCC CTGCAGCGCG CCGCCGAGCT TTACGCCCTG
GAGCGCTACG GCCCGGCCCG CCGGGAGTGG CAGCAGGCGC AGCCCAGGTT CGATGCCGAG
GAACTGGCAG CGGCAGCCGC CTGGGCGCAT GGGCTTGGCT GGCATGACCG GGCCATCGTC
GCCACTGCCG CGGCCGGTCA CATGACAGAC CTGGAACTGC GTTTTCCCGT GCCGCACAGT
GAGATCGTTT TTGCCGAGGC CAGTGCCACC GGCCTCAGCC CGGCCCTGGT CTACGGTCTG
ACGCGCCAGG AGAGCCTGTT CATGTCCGAT GTGGGATCTT CTGCCGGGGC CCTGGGATTG
ATGCAGATCA TGCCGCAGAC AGGCAAGCGC ATTGCGGGTT GGCACGGCGA AAAATTGTCC
CACCCCATAT TGCTGCTGCA GCCCGAGCGG AACATCCGTT ACGGAACCTC CTATCTGCGC
AGGCAGTTCG ACGACCTGCA AAATCACCCC TTCCTGGCCA CTGCCGCCTA CAATGCCGGG
CAGAGCCGGG TCAAAGGCTG GCTCCCGTCA AGCCTCATGC CTGCCGACGT CTGGGTGGAA
ACCATTCCGT TCAACGAAAC CAGGAATTAT GTGGAAAAGG TGGCGGCCTA CACGGCCATC
TACGAAACCC GCCTGGGCAA AGCCTCCGAG ATTCCGGGAG CGAGGCTGCC TCTGGTGCGT
CCTCGCGGCT GA
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| Protein sequence | MVFISRILVF VCMAALGVMI SAPSEAFGSE IRRRIYLQAE EALGKGQRQD YLARRAELGD
YVLLPYLTQQ DLEKRMGLGI SGEVRSFLRE HDGTPPAEAL RRSWLALLAK NAQWSRFVED
YRPQNDENLQ CFYGQALLAT GRRSEAMDQA ASLWLSGSSR PKSCDPLFNA WIKEGGLTRA
LTWQRIELAM QRGQANLARH LWRHLAPADA QWLDYWLRVD QNPALILERD WTTVTHDRMD
AILAHGMRKM TRADASRAAK EWDVLRRRNG LDRARFAAIE NDAALYMCLR FEPGAVARVE
SIPQDLRSDS VREWAVRAAL REQDWGAALH MLDGLSVTQK EEPRWRYWQG RALQENGRDR
EALVVFETLA ERQDYFSMLA LGHLGRPMVV PHIPLAVTDD AVRRVGKLPA LQRAAELYAL
ERYGPARREW QQAQPRFDAE ELAAAAAWAH GLGWHDRAIV ATAAAGHMTD LELRFPVPHS
EIVFAEASAT GLSPALVYGL TRQESLFMSD VGSSAGALGL MQIMPQTGKR IAGWHGEKLS
HPILLLQPER NIRYGTSYLR RQFDDLQNHP FLATAAYNAG QSRVKGWLPS SLMPADVWVE
TIPFNETRNY VEKVAAYTAI YETRLGKASE IPGARLPLVR PRG
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