Gene Dbac_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1796 
Symbol 
ID8377468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp2048115 
End bp2049131 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content64% 
IMG OID645001024 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003158303 
Protein GI256829575 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.749198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACA GTAAATCTCT CGTGCGCATC AGCAATGTGG TGAAGCACTT CGACATCTCC 
GGCGGCTTTC TGGACCGGAT CAGTTTTTCC GGCGGCACGC CGACCCTGAC CACGACCACA 
GTCAAGGCAT TAAACGATGT TTCCCTCGAC ATCGTGCAGG GCGAAATCCT GTCCGTGGTC 
GGCGAATCGG GCTGCGGCAA GTCCACGCTG GGGCGCACGG TGCTGGGCCT TTACCCGCCC 
ACCAGCGGCG AAATCGCCTT TCGCGGACAG CGTATCGACA ATCTCTCGCC AAAAGAAATG 
CTCCCCTACC GCCGCAAAAT GCAGATGGTC TTCCAGGACC CCTACGCGTC GTTGAACCCG 
CGCATGACCG TGCGCCAGAT CCTGGAAGAG CCGACGCATT TCCACTTTCC CGAGCTGTCC 
GGCTCCCAGG TTCAGGACAA GGTGGCCGAG GTCATGCGCC AGGTCGGCGT GGACCCGGCC 
TGGGCCGGAC GCTTCCCGCA CGAATTTTCC GGCGGCCAGC GCCAGCGCAT CAGCATTGCC 
CGCGCGCTGA TGGTCGACCC GGAATTCATC GTCGCTGACG AGCCCATCTC GGCGCTGGAC 
GTGTCCATCC AGGCCCAGAT CCTGAACCTG ATCATGGACT GCCAGGAGCG CTTCGGCCTG 
ACCTACATGT TCATCACCCA CGACCTGTCC GTGGTCGAGC ACATCAGCAC CCGGGTGGCC 
GTCATGTACC TCGGCACCCT GTGCGAACTG GCCGACAAGA AGAGCCTCTA CGGCGACCCG 
CAGCACCCCT ATTCCCGCGC CCTGCTCTCA GCCATCCCCA AGCTCGGCGC CAAGGGCTTC 
GCCCACATCC GCCTGAAGGG CGAGGTGCCC ACCCCCATCC ATCTGCCCAC GGGCTGCGTC 
TTCCACACCC GCTGCCCGTT CGTGGAGGAA CGCTGCCGCC GCGAGATCCC GAAACTGCTG 
AAACGCCCGA ACGGCAGCCA GGCCGCCTGT CACGCGCTGG AAGAAGGACG AATCTGA
 
Protein sequence
MTDSKSLVRI SNVVKHFDIS GGFLDRISFS GGTPTLTTTT VKALNDVSLD IVQGEILSVV 
GESGCGKSTL GRTVLGLYPP TSGEIAFRGQ RIDNLSPKEM LPYRRKMQMV FQDPYASLNP 
RMTVRQILEE PTHFHFPELS GSQVQDKVAE VMRQVGVDPA WAGRFPHEFS GGQRQRISIA 
RALMVDPEFI VADEPISALD VSIQAQILNL IMDCQERFGL TYMFITHDLS VVEHISTRVA 
VMYLGTLCEL ADKKSLYGDP QHPYSRALLS AIPKLGAKGF AHIRLKGEVP TPIHLPTGCV 
FHTRCPFVEE RCRREIPKLL KRPNGSQAAC HALEEGRI