Gene Dbac_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1766 
Symbol 
ID8377438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp2009221 
End bp2010081 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content59% 
IMG OID645000994 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003158273 
Protein GI256829545 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCT CCCTGCCCAG ATCCCGGGCC TATGACCGCG CTTTCGTGGT TTTCATCCTG 
CTGTATTTCA TTTTTCTTTT CGCGCCGCTC CTGGTGACCT GCGTGCTGGC CTTCAACAAT 
TCCGATTTCC CGTCCCTGCC CTGGCGCGGT TTCACCCTGG ACTGGTTCTT CTCCGCCGGG 
CCGAAACGGG TCGGCATCTT CGAGGACGCG GACAACCTGC GCGCCATCTG GGTCAGTTTC 
AAGACCGCGC TGTGGGTCTC GGCCTCGTGC GTGGTGGTGG GAGTCTGCGC CGCGTTCCTG 
TTCGAGCAGG AAAATTTCAA GGGCAAGAAT TTTCTGTATT TTCTGATGCT CGCTCCGCTG 
GTCATTCCGG GCGTGATCCT GGGCATTTCC ATCCTGCTTG GCGCGACCAC GGCGGGCATC 
TATTTCGAGG ACCACTGGAA CCTGGACGTC GAACTGTTCC GGCCCAGCTT CTGGCTGGTG 
GTGGTGGGGC AGTTTTCCTT CATCACCACC TTTGTGACCC TGGTGGTTTC GGCCAAGCTG 
CGCAAATTCG ACCATTCCCT GGAAGAGGCG GCGCTGAATC TCGGCGCGAC CCGCTTTCAG 
GTCATCTGGC ACATCACCCT GCGCTATCTG CGCTCATCGA TCATCGGCTC CGGGGCCGTG 
GCCTTTTTGA TGAGCTTCGA GAATTTCAAC ACCACCCTCT TTCTGGTCGG CTCACAGCCC 
ACCCTGCCCA TCAATCTGTA CCTGCAGGTC CGCGACGGTT CCACCCCGGT CATAAACGCC 
ATCTCGCTCC TGCTCATCGT CGGTACGTCC ATTCTGGCCC TGACCAATCT GTACATCGAT 
CGCAAGGAAG GCCTCAAGTA A
 
Protein sequence
MIRSLPRSRA YDRAFVVFIL LYFIFLFAPL LVTCVLAFNN SDFPSLPWRG FTLDWFFSAG 
PKRVGIFEDA DNLRAIWVSF KTALWVSASC VVVGVCAAFL FEQENFKGKN FLYFLMLAPL 
VIPGVILGIS ILLGATTAGI YFEDHWNLDV ELFRPSFWLV VVGQFSFITT FVTLVVSAKL 
RKFDHSLEEA ALNLGATRFQ VIWHITLRYL RSSIIGSGAV AFLMSFENFN TTLFLVGSQP 
TLPINLYLQV RDGSTPVINA ISLLLIVGTS ILALTNLYID RKEGLK