| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1732 |
|---|
| Symbol | |
|---|
| ID | 8377404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 1974238 |
|---|
| End bp | 1974882 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645000960 |
|---|
| Product | channel protein, hemolysin III family |
|---|
| Protein accession | YP_003158239 |
|---|
| Protein GI | 256829511 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
|---|
| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.301086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGT CTGCTTCCGA GTATTCTCTG GGTGAAGAGA TCGCCAACAG CATCACCCAT
GCCATCGCCG CCGGGATGTC CATCGCCGCC CTGGTGGTGC TCATCGCCCG GGCCGTGTCC
CAGGGCGACG CCTGGCACGT GGTCAGTTTT TCCATTTTCG GCGCTACGCT CATTCTGCTT
TATATGGCGT CGACCCTTTA TCATGCCATC CCCTTGCCGC GGGCCAAGCG CATTCTGAAA
ACCCTGGACC ACAGCGCCAT TTTCCTGCTC ATCGCCGGCA CCTATACGCC GTTCATGCTG
GTCAATCTGC GCGAGACCGT GGGCTGGACC GTTTTCGGCG TGGTCTGGCT GCTGGCCGTG
GCCGGGATCG TGCTCAAGTG CTGCTTCGTG TACCGCTTCA AGCGCCTGTC CCTGACCATT
TATCTTGGCA TGGGATGGCT GTGCGTGCTC ATCGGGCGCG ACATGTACGC CACCCTGTCC
GGCACGAGTT TGCTTTTACT GGCTCTGGGC GGCCTGGCCT ACACCCTGGG CGTCGTTTTC
TACGTGTGGA AGCGTCTGCC CTACAATCAC GCCATCTGGC ATCTCTTTGT CATCGCGGGC
AGTACCATGC ATTTCTTCTC GGTGCTGCAC ACTCTGCCCT CATAG
|
|---|
| Protein sequence | MNQSASEYSL GEEIANSITH AIAAGMSIAA LVVLIARAVS QGDAWHVVSF SIFGATLILL
YMASTLYHAI PLPRAKRILK TLDHSAIFLL IAGTYTPFML VNLRETVGWT VFGVVWLLAV
AGIVLKCCFV YRFKRLSLTI YLGMGWLCVL IGRDMYATLS GTSLLLLALG GLAYTLGVVF
YVWKRLPYNH AIWHLFVIAG STMHFFSVLH TLPS
|
|---|
| |