Gene Dbac_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1586 
Symbol 
ID8377257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1800105 
End bp1801049 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content58% 
IMG OID645000815 
Productglycyl-radical enzyme activating protein family 
Protein accessionYP_003158095 
Protein GI256829367 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02494] glycyl-radical enzyme activating protein family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0487316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGT TTGAAGACAA AAAGAAGAAA GGTCTGGTGT TCAATATCCA GAAATACTCG 
GTCCACGATG GGCCTGGAAT TCGGACCATC GTGTTTTTGA AGGGCTGTCC CTTGTCCTGC
CGGTGGTGCA GCAATCCAGA ATCGCAGCGC CGCGAACCGG AACTGGCGGT CAATCCCGGA
CGCTGTCTGA CCTTCGCCAA ATGCACGCGC TGCCTGCAGG CCTGCCTGCG CGGGGCGATC
ATCCGCGAGG TCGACGACTC CCTGCGCATC GACAGGTCGC TGTGCTCCGG ATGTCCGATG
AATTGCGCCG AGGCGTGTCC GTCCCAGGGC CTGATCGTTT ACGGACAGGA ACGCACCGTG
GACGATGTGC TGAGCGTGGT CGAGCAGGAC GCGGCCTTTT ACATCAGGTC CAGCGGCGGC
TTGACCCTCT CCGGCGGCGA GCCGCTTTTG CAGGGTGAAT TCGCCCTGGC ACTCTTGCGC
GACGCCCGGC GGCGCAGGAT CAAGACGGCG GTGGAGACCT GCGGCATGGT GCCATGGAAG
ACGCTGGAGG CAGCCGCGCC GTATCTGAAC TACGTTCTGT ACGACATCAA GCACATGGAC
AGCGGTATTC ACGAAGAGCA GACCGGATGT TCCAACGAAA CGATTCTGGA AAATTTCCAG
AAGCTGGCCG CGCTGGACCC GGACAAGTCG ATCCTGGCCC GCACCCCGGT CATCCCCGGA
TTCAATGATT CGGAAGAAGC GATCAAAGCC ATCGCGCAAT TCATAAAGCC TTTTCCGAAC
GTGCGTTACG AGATGCTTCC CTATCATCGC CTTGGGACAC AGAAATATCA TTTTCTGGAC
AGGGTGCCGC CCATGGATGA AGTAACTCTG GATAAATCCA TCATGGCAAA GCTGGTTGAC
GTCGCACGAA ATGTTCTTGG AGACAGGCTT GAAGTTGTCA AATAG
 
Protein sequence
MSAFEDKKKK GLVFNIQKYS VHDGPGIRTI VFLKGCPLSC RWCSNPESQR REPELAVNPG 
RCLTFAKCTR CLQACLRGAI IREVDDSLRI DRSLCSGCPM NCAEACPSQG LIVYGQERTV
DDVLSVVEQD AAFYIRSSGG LTLSGGEPLL QGEFALALLR DARRRRIKTA VETCGMVPWK
TLEAAAPYLN YVLYDIKHMD SGIHEEQTGC SNETILENFQ KLAALDPDKS ILARTPVIPG
FNDSEEAIKA IAQFIKPFPN VRYEMLPYHR LGTQKYHFLD RVPPMDEVTL DKSIMAKLVD
VARNVLGDRL EVVK