Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1342 |
Symbol | |
ID | 8377007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1510479 |
End bp | 1512623 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645000570 |
Product | M50 family peptidase |
Protein accession | YP_003157856 |
Protein GI | 256829128 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCTT CGCTGCTCAG TCCGTCGTGG TACCGGGTCG CCCCCCTCAA GCCACGCCTG CGCAGCCATG TGCGCATCGA GCGTCACGAG TATCGCGGCC AGGACTGGTA TGTGATTCAG GACGGTTTCA CCGGGCGCCA TCACCGTTTT TCCTCCGAGG CCTACCAACT GGTGGGCATG ATGGACGGCC GCCGGACCAT GGACCAGATC TGGCAGGCCG TTTGCGCCCG CCTGGGCGAC CACATGCCGA CCCAGGACGA GGTCATCGAA CTCCTGGCCC GCCTGTACCG CGCCGATCTC TTGCAGACCA GCGCCATCCT CGACTTTTCG GACCTGCACC AGCGCAGCGT GAAGAGCAGG CGTAGCCGCC TGTTCACGCA GATGGCTTCG CCGCTGTCCC TGCGCTTCCC GCTCCTGGAC CCGGACCGCT TCCTGACCCG GACCATGCCC TGGGTCCGCC CGTTTCTCGG CTGGCAGGCC TTGGCGGTCT GGATGTTGGT GGTGGCCGCG GCCGCGATCC TGGCCGTGCT GCACGGGGAC GCCCTGCAAG GCGATTTTTC CGACGCTCTT TTGAGCATGG AGAATCTGCT GCTGATCAGC CTGCTCTATC CCGTGCTGAA AGTCCTGCAC GAGTTCGGGC ATGCCTACAT GGTCAAGAAG GAGGGCGGTG AGGTGCACGA GATGGGGGTC ATGCTGCTGG TCTTCATGCC CCTGCCGTAC GTGGACGCGT CCTCGTCGAC GTCTTTTCGG GACAAGCGTC AGCGCATGCT CGTCGGGGGG GCGGGCATCA TGGTGGAGCT TTTCGTGGCC GCCGTCATGC TTCTGGTCTG GCTGAACGTG GAGCCCGGGG TAGTGCGTGC CCTGGCCTAC AAGACCCTGC TCGTGGCCGG GGTGTCGACG GTCCTCTTCA ACGGCAACCC GCTGCTACGT TTCGACGCCT ATTACATTCT TTCGGACTGG CTGGAGATTC CCAACCTGGC GCAGCGCGGC GTCGGCTATC TGGGCTACCT TTGCAAGCGG TATCTGCTGG GAGTGGACAG CGCCGAATCA CCGGCCCGCA GCCCCGGGGA GGCCCGCTGG TTGTTCTTTT ACGCCGTGGC CGCCTTCTGC TACCGGATTT TCATTTCCGT GCGCATCGTG CTCTTCGTTG CCGGGCAGTT TTTTTTCGTC GGCATCGTCC TGGCCATCTG GGCGGTGTTC ATGATGCTCG TCATGCCCAC GTGGCGCGTG GCCGGTTTTC TCGTCAAGGA TACTCATATG CAACGCAAGC GCATTCGCGT CATGATGACG GTGGTCCTTC CCCTGGTTCT GTTGGCGGGG GTTCTGGCTA TGGTCCCGGC GCCGCTGTAC ACCAACGCCG AAGGCGTGGT CTGGGTTTCG GAGGAATCCA GGGTTTACGC CGCTGCCGGG GGGATGGTGG AGGCCGTGGT CACTCCCGGC GGGACCACCG TACAGTCCGG CGATCCGCTG ATCCGCAGCA CGGACCTGTT GCTGGAAACC CAGGTCCGGC TGTTGCAGGC CCGCCGGGAG GAATTCCAGG CCCGCCGCCA GTTGAGCATG AACAGGGACC GCGCCGAGAC GGGCATGCTG GATGAGGAGC TGAAAAGCAT TGAAACGGAA ATCGCTCGCG CCCAGGAGCG TCAGGCGGCC CTGATCACGC GCAGCCCTGC GGCCGGGATT TTCGTGCTTC AGGACGAGGC GGATTTGCCG GGGCGCTTTC TGCGGCGCGG CGAGCCCGTA GGCTACATCG TCGACCCGCT GCGCATGCAC ATCAGGACCG TGGTCACCCA GGCCGATATC GAGCGCGTGC GCTCGGATGT CCGCAGCGTG GAGGTGCGGC TGGCCGAGAA CATCGGACAG GTGCTGCCGG CGCGGGTCTC CCGCGAGGTG CCCGCCGCGA GCCGCGTGTT GCCGAGCCTG GCCTTCAGTC TCGACGGCGG CGGGCGGTTC GCCCTCGATC CCCGGGAAAA GGAGGCTCCC CAGGTGCTGG AGCGCCTCTT TCAGTTTGAC CTGGTGCTTG AGGGGCCCGT GCCGGGCAAC GTGGAGGAGC GCGTCTTCGT CCGCTTCGAG CACAGCCCCG AACCTTTGGC CTGGCGGGCC TACCGGGCGC TGCGGCGTCT GCTGCTCACC CGCCTTGCCG TGTAG
|
Protein sequence | MSASLLSPSW YRVAPLKPRL RSHVRIERHE YRGQDWYVIQ DGFTGRHHRF SSEAYQLVGM MDGRRTMDQI WQAVCARLGD HMPTQDEVIE LLARLYRADL LQTSAILDFS DLHQRSVKSR RSRLFTQMAS PLSLRFPLLD PDRFLTRTMP WVRPFLGWQA LAVWMLVVAA AAILAVLHGD ALQGDFSDAL LSMENLLLIS LLYPVLKVLH EFGHAYMVKK EGGEVHEMGV MLLVFMPLPY VDASSSTSFR DKRQRMLVGG AGIMVELFVA AVMLLVWLNV EPGVVRALAY KTLLVAGVST VLFNGNPLLR FDAYYILSDW LEIPNLAQRG VGYLGYLCKR YLLGVDSAES PARSPGEARW LFFYAVAAFC YRIFISVRIV LFVAGQFFFV GIVLAIWAVF MMLVMPTWRV AGFLVKDTHM QRKRIRVMMT VVLPLVLLAG VLAMVPAPLY TNAEGVVWVS EESRVYAAAG GMVEAVVTPG GTTVQSGDPL IRSTDLLLET QVRLLQARRE EFQARRQLSM NRDRAETGML DEELKSIETE IARAQERQAA LITRSPAAGI FVLQDEADLP GRFLRRGEPV GYIVDPLRMH IRTVVTQADI ERVRSDVRSV EVRLAENIGQ VLPARVSREV PAASRVLPSL AFSLDGGGRF ALDPREKEAP QVLERLFQFD LVLEGPVPGN VEERVFVRFE HSPEPLAWRA YRALRRLLLT RLAV
|
| |