Gene Dbac_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1342 
Symbol 
ID8377007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1510479 
End bp1512623 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content65% 
IMG OID645000570 
ProductM50 family peptidase 
Protein accessionYP_003157856 
Protein GI256829128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCTT CGCTGCTCAG TCCGTCGTGG TACCGGGTCG CCCCCCTCAA GCCACGCCTG 
CGCAGCCATG TGCGCATCGA GCGTCACGAG TATCGCGGCC AGGACTGGTA TGTGATTCAG
GACGGTTTCA CCGGGCGCCA TCACCGTTTT TCCTCCGAGG CCTACCAACT GGTGGGCATG
ATGGACGGCC GCCGGACCAT GGACCAGATC TGGCAGGCCG TTTGCGCCCG CCTGGGCGAC
CACATGCCGA CCCAGGACGA GGTCATCGAA CTCCTGGCCC GCCTGTACCG CGCCGATCTC
TTGCAGACCA GCGCCATCCT CGACTTTTCG GACCTGCACC AGCGCAGCGT GAAGAGCAGG
CGTAGCCGCC TGTTCACGCA GATGGCTTCG CCGCTGTCCC TGCGCTTCCC GCTCCTGGAC
CCGGACCGCT TCCTGACCCG GACCATGCCC TGGGTCCGCC CGTTTCTCGG CTGGCAGGCC
TTGGCGGTCT GGATGTTGGT GGTGGCCGCG GCCGCGATCC TGGCCGTGCT GCACGGGGAC
GCCCTGCAAG GCGATTTTTC CGACGCTCTT TTGAGCATGG AGAATCTGCT GCTGATCAGC
CTGCTCTATC CCGTGCTGAA AGTCCTGCAC GAGTTCGGGC ATGCCTACAT GGTCAAGAAG
GAGGGCGGTG AGGTGCACGA GATGGGGGTC ATGCTGCTGG TCTTCATGCC CCTGCCGTAC
GTGGACGCGT CCTCGTCGAC GTCTTTTCGG GACAAGCGTC AGCGCATGCT CGTCGGGGGG
GCGGGCATCA TGGTGGAGCT TTTCGTGGCC GCCGTCATGC TTCTGGTCTG GCTGAACGTG
GAGCCCGGGG TAGTGCGTGC CCTGGCCTAC AAGACCCTGC TCGTGGCCGG GGTGTCGACG
GTCCTCTTCA ACGGCAACCC GCTGCTACGT TTCGACGCCT ATTACATTCT TTCGGACTGG
CTGGAGATTC CCAACCTGGC GCAGCGCGGC GTCGGCTATC TGGGCTACCT TTGCAAGCGG
TATCTGCTGG GAGTGGACAG CGCCGAATCA CCGGCCCGCA GCCCCGGGGA GGCCCGCTGG
TTGTTCTTTT ACGCCGTGGC CGCCTTCTGC TACCGGATTT TCATTTCCGT GCGCATCGTG
CTCTTCGTTG CCGGGCAGTT TTTTTTCGTC GGCATCGTCC TGGCCATCTG GGCGGTGTTC
ATGATGCTCG TCATGCCCAC GTGGCGCGTG GCCGGTTTTC TCGTCAAGGA TACTCATATG
CAACGCAAGC GCATTCGCGT CATGATGACG GTGGTCCTTC CCCTGGTTCT GTTGGCGGGG
GTTCTGGCTA TGGTCCCGGC GCCGCTGTAC ACCAACGCCG AAGGCGTGGT CTGGGTTTCG
GAGGAATCCA GGGTTTACGC CGCTGCCGGG GGGATGGTGG AGGCCGTGGT CACTCCCGGC
GGGACCACCG TACAGTCCGG CGATCCGCTG ATCCGCAGCA CGGACCTGTT GCTGGAAACC
CAGGTCCGGC TGTTGCAGGC CCGCCGGGAG GAATTCCAGG CCCGCCGCCA GTTGAGCATG
AACAGGGACC GCGCCGAGAC GGGCATGCTG GATGAGGAGC TGAAAAGCAT TGAAACGGAA
ATCGCTCGCG CCCAGGAGCG TCAGGCGGCC CTGATCACGC GCAGCCCTGC GGCCGGGATT
TTCGTGCTTC AGGACGAGGC GGATTTGCCG GGGCGCTTTC TGCGGCGCGG CGAGCCCGTA
GGCTACATCG TCGACCCGCT GCGCATGCAC ATCAGGACCG TGGTCACCCA GGCCGATATC
GAGCGCGTGC GCTCGGATGT CCGCAGCGTG GAGGTGCGGC TGGCCGAGAA CATCGGACAG
GTGCTGCCGG CGCGGGTCTC CCGCGAGGTG CCCGCCGCGA GCCGCGTGTT GCCGAGCCTG
GCCTTCAGTC TCGACGGCGG CGGGCGGTTC GCCCTCGATC CCCGGGAAAA GGAGGCTCCC
CAGGTGCTGG AGCGCCTCTT TCAGTTTGAC CTGGTGCTTG AGGGGCCCGT GCCGGGCAAC
GTGGAGGAGC GCGTCTTCGT CCGCTTCGAG CACAGCCCCG AACCTTTGGC CTGGCGGGCC
TACCGGGCGC TGCGGCGTCT GCTGCTCACC CGCCTTGCCG TGTAG
 
Protein sequence
MSASLLSPSW YRVAPLKPRL RSHVRIERHE YRGQDWYVIQ DGFTGRHHRF SSEAYQLVGM 
MDGRRTMDQI WQAVCARLGD HMPTQDEVIE LLARLYRADL LQTSAILDFS DLHQRSVKSR
RSRLFTQMAS PLSLRFPLLD PDRFLTRTMP WVRPFLGWQA LAVWMLVVAA AAILAVLHGD
ALQGDFSDAL LSMENLLLIS LLYPVLKVLH EFGHAYMVKK EGGEVHEMGV MLLVFMPLPY
VDASSSTSFR DKRQRMLVGG AGIMVELFVA AVMLLVWLNV EPGVVRALAY KTLLVAGVST
VLFNGNPLLR FDAYYILSDW LEIPNLAQRG VGYLGYLCKR YLLGVDSAES PARSPGEARW
LFFYAVAAFC YRIFISVRIV LFVAGQFFFV GIVLAIWAVF MMLVMPTWRV AGFLVKDTHM
QRKRIRVMMT VVLPLVLLAG VLAMVPAPLY TNAEGVVWVS EESRVYAAAG GMVEAVVTPG
GTTVQSGDPL IRSTDLLLET QVRLLQARRE EFQARRQLSM NRDRAETGML DEELKSIETE
IARAQERQAA LITRSPAAGI FVLQDEADLP GRFLRRGEPV GYIVDPLRMH IRTVVTQADI
ERVRSDVRSV EVRLAENIGQ VLPARVSREV PAASRVLPSL AFSLDGGGRF ALDPREKEAP
QVLERLFQFD LVLEGPVPGN VEERVFVRFE HSPEPLAWRA YRALRRLLLT RLAV