| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1132 |
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| Symbol | |
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| ID | 8376796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1238619 |
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| End bp | 1239794 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645000365 |
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| Product | twitching motility protein |
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| Protein accession | YP_003157652 |
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| Protein GI | 256828924 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.297153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGAG CGCATCTTGA TCATATTTTG CATCAGGTTC TCGATTTTGC ACCTGATACC
TCAGATATTC TTTTTACTGT GAACAAGCTT GTGCAGGCGG AAGTTCATGG CGAGCTCGTC
AATGCGAAGA TAGAACCAAA TCCGGGGCCG CTACTGCCCA TCCAGGTTGA AGCTGTGGCC
ATGTGCCTCA TGGGCCGCAA TATCCGCCTT TACGAGGACC AACTGCGCAC AGGGTCTTGC
GATCTTTCCT ACGAGCTGCC GGGCCGTTGC CGTTTCAGGG TCAACATTCT GGGGCAGAAG
GGCTCCTTGG CCATAGTCAT GCGCAAATTG ACCTCCGTCG TGCCCACGAT CAACGATCTC
TCCCTCCCGG AAGTTTTTTA CGAGATGTCC AAGGAGAAGT ACGGTCTCAT TCTGGTCACT
GGCGCCACAG GCACAGGTAA GACTACCTCC CTTGCCGCCC TCATCGACAA TATAAACCAG
ATGCACCGCA AGCATATCGT CACTCTTGAG GATCCCATCG AATATGTCCA CGAGCACAAA
CTCGGGACCG TGAACCAACG TGAACTCGGA CTTGATTTCG ACTCTTTCGC TTCAGGTCTT
CGGGCCGCAT TGCGCCAGGC GCCAAAGGTC ATCCTGGTGG GTGAAATACG TGATCGCGAG
ACCATCACCA TCGCTCTGGA AGCTGCGGAG ACAGGTCATC TCGTACTCGG CACCCTGCAC
ACCAGCGACA CTGGTCAGAC TATCAACCGT ATTATCGGCA TGTTTGAACT GGCTGAAGAG
CGCTTGATAC GTTCACGTCT GGCAGAAAGC CTCAAATATG TCGTTTCGCA ACGTTTGATG
CCTCGTTTGG GAGGAGGGCG CGTTCCGGCT TTTGAAGTTT TGAAGTCGAA CCTGCGTGTC
AAAGAAGTCA TTTACAACGG TGAGAGTGAA GACAAGACCT TTTATAATAT TGTTGAATCC
GGTGATGCCT ACGGCATGAT CACTTTCGAC AAATTCATAG CCAACCAATT TTACGAAAAT
ATAATTTCCG AAGATATTGC CATGCTGCAC GGGTCGGATA AATCTCGTTT GGCCCAGATG
ATCGACAAGA TCAAAACCGC CCGTGGAGAG AAGGTTACGG ATATTGAAGG CCTTGAGCTT
GATCACGACT ATGAGCGTAA GAGCTCCTTT TTTTGA
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| Protein sequence | MQRAHLDHIL HQVLDFAPDT SDILFTVNKL VQAEVHGELV NAKIEPNPGP LLPIQVEAVA
MCLMGRNIRL YEDQLRTGSC DLSYELPGRC RFRVNILGQK GSLAIVMRKL TSVVPTINDL
SLPEVFYEMS KEKYGLILVT GATGTGKTTS LAALIDNINQ MHRKHIVTLE DPIEYVHEHK
LGTVNQRELG LDFDSFASGL RAALRQAPKV ILVGEIRDRE TITIALEAAE TGHLVLGTLH
TSDTGQTINR IIGMFELAEE RLIRSRLAES LKYVVSQRLM PRLGGGRVPA FEVLKSNLRV
KEVIYNGESE DKTFYNIVES GDAYGMITFD KFIANQFYEN IISEDIAMLH GSDKSRLAQM
IDKIKTARGE KVTDIEGLEL DHDYERKSSF F
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