| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1041 |
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| Symbol | |
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| ID | 8376702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1129142 |
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| End bp | 1132507 |
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| Gene Length | 3366 bp |
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| Protein Length | 1121 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645000281 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_003157570 |
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| Protein GI | 256828842 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.700011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGAATA TATTTTTTTG TCTGCTCATG TTTTTATTCA TCCCTCATGC TTTTGGTCAG
GATGAAAAAA AGATTAATGT ATTGTACATA AATTCTTACC ATAACGGATA TGAATGGTCC
GATAGTATAT TCGATGGCGT GCGCGAAAAA TTCAGGAGTA GCGGGAAGAA TATTTATCTT
CAGATAGAAT ATATGGATTC GAAGAGATAC TCTGGAGAAA AAATTAATGA AATACTTTTT
AATTACTATA AGTTTAAGTT CAAAACGACG CATTTTGATC TTATCGTCAC TTCTGACAAT
AATGCTTATG AATTTATTTC AGAGCACGGC GAGGATCTTT TTCCCAATGT TCCCATCGTT
TTTTGCGGAA TCAATGACGT GGAGGCTGGG CAGGTGCCCA TGCGTTCACG CATGACCGGA
GTGCTGGAAG AATTCGAAGT GCCGTGGAAT ATCGAACTGG CGCTTCAATT TCATCCGGGA
AAGAAGCGCC TGGTGGTCAT CGGTGATCAG AGCATGACCG GGGTGGCCAT TGCCAATCAG
GTCCGGGCGC AGGTTCCCGG CCTGCCCAAG GAGATCGAGG TCGAATTTCT GGATGAGTTC
ACTCTCGACG AATTGGTGGC AAAAGTGCGT TTCGCTTCTG CCGACAGCAT CTTTTTCTTC
ATCCCCTTTT ACAAGGATGT GGGCGAGGCC GTGTATTCGG CCCAGGATCT GCTTGAAATA
GTATGGCGGG AAACGGGCGT GCCGCTCTAC AGCGCCTGGG AGTTTTTGCT CGGCCACGGC
ATGGTGGGTG GAAAGATGAT CAGCGGATTC AGCCACGGCC AGGCCGTGGC GGAGATGGGG
CTGCGCATTC TGGACGGCGA ATCCCCGGCC GACATTGAAA TATCCATCAG TCCGGACGAT
CCGCCCAAGT TCGACTACCG CGTCCTCATG CGCCTGGGCA TCAATCAGAA CCTGTTGCCC
GAAGGCAGCA TCCTCATCAA CGAGCCTTCC CCGTTCTATT CCATCAACAG GCACCAGTTC
TGGACCATCA TCATAAGTCT GGTCATCTTG TCGCTGGTGC TCATCCTGCT GGTGATCAAC
ATCTGGGAGC GCAAGCAGAT CGAGGTGCGG ATCAAGAACC AGCTCTCGTT TCTGCGCACC
CTCATGGATA CGCTGCCCAT CCCCATCTAT TTCACGGACC GCAGCGGAGC CATCGCTGGA
ATAAACCGGG CGTTCGAGCA CTGGTTCGGG GTCAGCTGGG AGCATGACAA GGGTTTCGAG
TCCCAGGAGC TGGCGCTGGT CGAGACGCGT TTTGCGCCCC TGCTCGACCT GCGCATGGAT
TCCTACGAGG CCCAGATCCG GCACGGCGAC GGCACGTTGC GCCCGGCGGT GCTGCACAAG
GCCACCTACG CCGACGCCCA GGGTGAGAAT GCCGGGATAG TCGGCGTCAT CTACGACATC
TCCGATCGCA AGAAAGCCGA GGACGATCTG CGCGCAGCCG AGGAAAAATA CCGCACCATT
TTCGAAAATT CGGCCCTGGG CATTTTTCAG ACCACGCCCG ATGGCTCCTG GATGGTCGCA
AACCCTGCCC TGGCCAGGAT GCTCGGCTAC GCGAGCCCGG AAGCGCTGAT CGCGGGCAAT
CCGAATATCT CGTCCCTGTA TTTTCAGCAA AGCGATCGGG AGAGGGTTGT CGACCTCTAC
CAGCAAAACA GAGGCAGTGT GGAGTTCGAG GTTCTTTTCC GCACCCGTGC CGGCGAAATC
ATTACCGCCA ATCTGAACGC CCGTGCCGTG CGCGGATGCA ATGACGATTT CTGCCATTTC
GAGGGATTCG TGGAGGACAT CACGGACCGC AAGGCTGCGG AGCTGGCTCT GGCCGCATCC
GAGGCCATGT TGCAGCTGGT CCTTGATACC ATCCCCCAGC TTGTGCACTG GAAGGATCGC
GAATTGAGAA TCATCGGCGC GAATCGAAAT TTTCTGGCGC ATGTCGGCCA GACCGAACTT
TCGGTCATTT ACGGCAAGAA GTACGCCGAG GTTGTGAGCT ATGCCCATGA GGTGGAGCAG
ATTTCCAGGC TCGACCAGGA AGTGGTCGAG ACCGACGAGC CGCGATTTCG ACTGCGTCTG
GAGACGCGCA ACCTGGCCGG CGAGAACATG TGGCTGCTGG TCAACAAGGT GCCCCTGCAC
GGACCGCACG GGGAGGTGGT GGGTATCCTC AGCACTGCCG AGGACATTAC CCAGACCATG
AACCTGGAAA AACAGCTGCT ACAGTCTCAG AAAATGGAGG CGATCGGCAC TCTAGCCGGA
GGAATCGCCC ATGATTTCAA TAATATATTG ACATCGATCA TGAACTCTAC CGAACTCGCC
ATGGAAGATA TCCCCGAAGA CAGCCTGAAC TGGAAGGATC TGGAGCGCTC TCTCAAGGCC
GCTGTTCGCG GCAGCGGTCT GATCAAGCAG ATTCTGACTT TCAGCAGGCC AACCCAGGAA
GGATTTCTGC CCACGGACCT GCGTGAGGTC GTCAGTGAAG CCGTGGCCCT CATTCGCGTG
TCCATGCCGC GCAACATCAC GGTCCTGGCC GAAATTGAAG ACGACCTGCC GCTCTGCCTG
GCCGACCCGA CACAGGTTCA TCAGATCGTC ATGAACCTTG CGACCAACGC ATTTCAGGCT
TTGGGCGAGG GCGGCGGCAA TATTTCCATC CGCTTGAGCA AAATGATCTT GGACCGCGAT
GACGCGCAGC TCGGCAATCT TGTCCCGGGA GTCTACAGCA GGCTGTGTAT CGAAGACGAC
GGTCCCGGCA TCGACGAGGA TATCCAGGAC AAGATCTACG ATCCGTTCTT CACCACCAAG
GGCAAGGGCG AGGGGACCGG CCTGGGGCTG GCCGTGGTGC ATGGAATCGT GCGCAACCAT
GGTGGCGAAA TCAGGCTCGT CAGCACTGCG GGTTTCACCC GCTTCGACAT CCTGCTGCCG
ACCATGAACG AGCTGTGCCT CCTGCCCGGC GAGTGTGCGG GCGCTCTGGC CATGGGCAAT
GAGAGGCTGG CCTTCATCGA GGACGACGAG GACCAGTTGC TGCTCATACC CCGTGTTCTT
GAGCAGCTCG GCTATGAAGT GCATTCCTTT CAGAATCCTG CCGAAGCCGT CTTCACTCTT
TGCGAGGAGG GCTTGCCTTT TGATCTGGTC ATTACGGATT TTGACATGCC CGGCATGAAC
GGCTTCGATG TTGCAGGAAT TTTGCAAGAG CGTCGGCCTG ATTTGCCGGT GATCATGGTT
TCCGGGAGAA AGCAGGCCGA GGAATTTCTG GGCCAGGCCG GAAACATCAA ATTTTTCCTG
AGTAAACCGT ACAATAAGGA CATGCTCGGA CGCGCCATCC GCGATGTTCT GGACAAGGAA
GCATAA
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| Protein sequence | MRNIFFCLLM FLFIPHAFGQ DEKKINVLYI NSYHNGYEWS DSIFDGVREK FRSSGKNIYL
QIEYMDSKRY SGEKINEILF NYYKFKFKTT HFDLIVTSDN NAYEFISEHG EDLFPNVPIV
FCGINDVEAG QVPMRSRMTG VLEEFEVPWN IELALQFHPG KKRLVVIGDQ SMTGVAIANQ
VRAQVPGLPK EIEVEFLDEF TLDELVAKVR FASADSIFFF IPFYKDVGEA VYSAQDLLEI
VWRETGVPLY SAWEFLLGHG MVGGKMISGF SHGQAVAEMG LRILDGESPA DIEISISPDD
PPKFDYRVLM RLGINQNLLP EGSILINEPS PFYSINRHQF WTIIISLVIL SLVLILLVIN
IWERKQIEVR IKNQLSFLRT LMDTLPIPIY FTDRSGAIAG INRAFEHWFG VSWEHDKGFE
SQELALVETR FAPLLDLRMD SYEAQIRHGD GTLRPAVLHK ATYADAQGEN AGIVGVIYDI
SDRKKAEDDL RAAEEKYRTI FENSALGIFQ TTPDGSWMVA NPALARMLGY ASPEALIAGN
PNISSLYFQQ SDRERVVDLY QQNRGSVEFE VLFRTRAGEI ITANLNARAV RGCNDDFCHF
EGFVEDITDR KAAELALAAS EAMLQLVLDT IPQLVHWKDR ELRIIGANRN FLAHVGQTEL
SVIYGKKYAE VVSYAHEVEQ ISRLDQEVVE TDEPRFRLRL ETRNLAGENM WLLVNKVPLH
GPHGEVVGIL STAEDITQTM NLEKQLLQSQ KMEAIGTLAG GIAHDFNNIL TSIMNSTELA
MEDIPEDSLN WKDLERSLKA AVRGSGLIKQ ILTFSRPTQE GFLPTDLREV VSEAVALIRV
SMPRNITVLA EIEDDLPLCL ADPTQVHQIV MNLATNAFQA LGEGGGNISI RLSKMILDRD
DAQLGNLVPG VYSRLCIEDD GPGIDEDIQD KIYDPFFTTK GKGEGTGLGL AVVHGIVRNH
GGEIRLVSTA GFTRFDILLP TMNELCLLPG ECAGALAMGN ERLAFIEDDE DQLLLIPRVL
EQLGYEVHSF QNPAEAVFTL CEEGLPFDLV ITDFDMPGMN GFDVAGILQE RRPDLPVIMV
SGRKQAEEFL GQAGNIKFFL SKPYNKDMLG RAIRDVLDKE A
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