| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1000 |
|---|
| Symbol | |
|---|
| ID | 8376661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 1086475 |
|---|
| End bp | 1087761 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645000242 |
|---|
| Product | Phenylacetate--CoA ligase |
|---|
| Protein accession | YP_003157531 |
|---|
| Protein GI | 256828803 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.354493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACTGGC AGAGCGAATA TGAATGCATG GAGCGTGGGG AGCTGGAACT CTTGCAGCTG
GAGCGGTTGC AGGCCACCCT GAACCGCGTG GCCCGCAATG TGCCGCTGTA TCGCAAGCGT
TTTGCGGAAC TGGGCATCGA CCCCTATGAC GTGCAGTCTT TAGAGGACGT GAAACGCCTG
CCTTTCACCA CCAAGGACGA TCTGCGCCAG AACTATCCGT ACGGCCTTTT CGCCGTGCCC
CTGCGCGATG TCGTGCGCAT GCAGGCTTCC ACCGGCACCA CGGGCAAGCC TACGGTGGTG
GGGTACACCT CCGGCGATGT GCGCCGCTGG TCCGAGCTGG CGGCCCGCAT CCTCACGGCG
GGCGGGGTGA CCAAGGACGA CGCCGTGCAG ATCGCCTTCA ACTACGGCCT TTTTACCGGC
GCTTTCGGCG TGCATTCCGG CGCGGAACTC ATCGGCGCGT CGGTCATTCC CAGTTCCGGA
GGCGACCCGC GCCGCCAGAT TTCCATCATG CAGGACTACC GCACCACGGC CCTTGTCTGC
ACCCCGAGCT ACGCCCTGCA TCTGGCCGAC ACTCTGGACG AGATGAACAT CAACAAGACC
GCGCTCAGTC TGCGCTTCGG CCTGTTCGGC TCCGAACCCT GGACCGAGGA GACGCGCCAG
GAGATCGAGA CCCGGCTCGG CATCCAGGCC ACGGACAATT ACGGCCTGAG CGAAATCACG
GGCGTGGCCG GGGAATGCCT GGAACGGGCC GGTCTGCACA TCAACGAGGA CCATTTCCTG
GCCGAGATCG TGGACCCGCA GACCGGAGAG GTCTTGCCTG CCGGAGCCAA GGGCGAGCTG
GTGCTGACCA CCCTGACCAA GGAAGCCTTC CCCCTGATCC GGTTCCGCAC CGGAGACCTG
ACCACGCTCA CCGACGCCCC CTGCGCCTGC GGCCGGACGC TGAGGCGCAT GACCCGTATT
CCCGGCCGCA GCGACGACAT GCTCATCATT CATGGCGTGA ACGTTTTTCC GGCCCAGATC
GAGGCGGTCA TCTCCGGCAC GGGACTGACC GATCCTCATT ACCAGATCGT GCTGGACCGG
GTCGGGCACA TGGATCTGGC CACCATCATG CTCGAAGCCC CGGAATCCTT CTGCACGGAC
TCCATCAAGA TATCCCAGCG CATCGTCGAA AACGTGCGTA TCCGACTACA GACGGAGCTG
GGTGTGGCTT TTGAGGTCCG GCTGGTGGAA CCGAGGACCA TCGAGAGAAA CAACGGGAGC
AGGATCGTGG ATCGTCGCAA GATGTGA
|
|---|
| Protein sequence | MYWQSEYECM ERGELELLQL ERLQATLNRV ARNVPLYRKR FAELGIDPYD VQSLEDVKRL
PFTTKDDLRQ NYPYGLFAVP LRDVVRMQAS TGTTGKPTVV GYTSGDVRRW SELAARILTA
GGVTKDDAVQ IAFNYGLFTG AFGVHSGAEL IGASVIPSSG GDPRRQISIM QDYRTTALVC
TPSYALHLAD TLDEMNINKT ALSLRFGLFG SEPWTEETRQ EIETRLGIQA TDNYGLSEIT
GVAGECLERA GLHINEDHFL AEIVDPQTGE VLPAGAKGEL VLTTLTKEAF PLIRFRTGDL
TTLTDAPCAC GRTLRRMTRI PGRSDDMLII HGVNVFPAQI EAVISGTGLT DPHYQIVLDR
VGHMDLATIM LEAPESFCTD SIKISQRIVE NVRIRLQTEL GVAFEVRLVE PRTIERNNGS
RIVDRRKM
|
|---|
| |