| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0874 |
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| Symbol | |
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| ID | 8376529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 953633 |
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| End bp | 957226 |
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| Gene Length | 3594 bp |
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| Protein Length | 1197 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645000113 |
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| Product | pyruvate phosphate dikinase PEP/pyruvate- binding |
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| Protein accession | YP_003157408 |
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| Protein GI | 256828680 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGA GCGACAAGAA GAGTTCCAAA AAGAAAGCCG ATACGCCTGC GGAGGTCGCA
ACGCCTTCGG CCAGGATAGA GCAGATTCAA AAGCAGCTCG TCCTGACCGG CAAGGACATC
GTGACCATTG GCGAAGATGC CGAGCTTCTG GTCGGCGGCA AGAACTACAA CACTGCCATC
ATCAGCACCA TTGAAGGCAT CCGGGCTCCG CAATTCAGAG CCATCTCCTC CATCGCCTTC
CATAAGCTTC TCGATGAGAC AAAGGTCAAC GCCGCCCTGG TCCGCACTTC GGTGGACAGG
GCGTACGATT CCATGGACTG GACAGATGCC GAGATCAACA AGGATTCGGA ATTTCTGCAG
AAGTTCGTCC GCAAGATCGC CCTTGATGTG AAGGAGGCCG CCAAGAAACA GGAAGGCACC
TTGATCCGCC TGCGTACCTT CATCAACAAC GTGGTGGAAG GTTTCGCCGT TTCCCCCGAG
GGCATTGATC AGCTGCGCAA AAGGTCCGTG CTTGTGCAGG CCGCCATCCT GTCCGTGGAT
CTCCCCAAGG ATGTGGCCGA AGCCGTGCGC GGAGCCTACC TTGAGATCTG CAAGGAAGCG
GGCCTGGAGA ACGAACCGGT TGCCGTACGC TCCTCCGCGG CCGGCGAGGA CAGCCGCAAG
AAGGCTTTTG CCGGACTGCA GGACACGTAC CTCAATATTG TCGGCGAGAA TTATGTCGTG
CAGGCCTATC ACTGGGACTG TGCTTCCGCC TACAACCTGC GCTCCATGAC CTACCGGCGC
GAGGCCATCC TTGATGCCGT GGCCAAGGCC GAGCAGACCG GCGATGACCA GATCGGGATC
AAGGCCAAGC AGGAGTGGGC CATCGAGAAC ACCTCCCTGT CCGTGTGCAT CATGCGCATG
ATCAACCCGG TCATTTCCGG CACGGCCTTC TCCGCCGACA CGTCCACCGG GTGCCGGGGC
ACGTCGCGCC AGGATCTCGT GTCCATCGAC GCCAGCTACG GCCTGGGCGA GGCCGTGGTC
AGCGGCCTGG TGACCCCCGA CAAGTTTTAC GTGTTCCAGC GCGAGGACGG TCAGGAGATC
GTCATCCGCT ACATGGGCTG CAAGGACAAG CGCATTGTCT ACAAGGAATC CGGACGCGGG
ACCAAGGTCG AAACCGTGGC CGAGGACATG GCTTTTAGGT GGTCCCTGTC TCTGGCTCAG
GCCGAGTCCG TGGCCAAGGG CGTGCGCTGC ATCAGCAAGG GCTACGGCGG AATGATCATG
GATTCGGAGT TCTGCATCGA CCAGTGGGAT CGCCTCTGGT TCGTGCAGGC CCGTCCCGAG
ACCCGCTGGA ATGAAGACCT TGAGCATCAT CCCCACACCA TTTTCATGCG CCGCAAGGAA
GTGGATCCCG AAGCCGCCAA GCATGCCGAA GTGCTGCTCG AAGGCAACGG CGCATCCCGT
GGCGCGGGTC AGGGTTCGGT GCGGTATCTG CGTTCCGCCC TGGAACTGAA CAAGATCAAC
AAAGGCAACA TCCTGGCCGC CGAGCGTACC GATCCCGACA TGGTGCCCGG CATGCGCATC
GCCGCGGCCA TCATGGCCGA CGCCGGCGGT GACACCAGCC ACGCCGCCAT CACCTCCCGC
GAGTTGGGCA TCCCGGCGGT CATCGGCATC AAGCGTCTGG AAAAACTGCG CACCCTGGAC
AACCACGAAG TGACCGTGGA CGGCTCCCGG GGCAAGATTT ATCGGGGCCT TTTGCCGCTC
ATCGACGTGG GCGGCGAGAT TGATGTCAGC AAGCTGCCGG CCACCAAGAC CAAGGTCGGC
CTGATTCTGG CCGACGTGGG ACAGTCCCTG TTTTTGTCAC GGCTGCGCGA TGTGCCTGAT
TTTGAAGTGG GCCTGCTGCG CGCCGAGTTC ATGCTCGGCA ATATAGGCGT GCACCCCCTG
GCTCTTGAAG CCTACGATCT GGGCACCCTG GAAACCGTGG TCGGCACCAA GCTCGAAATT
CTCGAGAACG ACCTGACCAA GATCGTTTTT GAGCAGATGG CTGCGGGCAT CGTCTCCCTG
GACATCAAGC TGCGCAGTTA CGTGGGCATC GTCACCGGAC TGGCCCGCAA GATGGAAGAG
CTGACCGAGC GGGAAGGGGC CAAGGGCACC GACGAGGTGC TGGCCATCCA CCGCCAGTTG
CGCGAACTGG ACAAGAAGCT TGACGAACAT CTGGAGTTCG CCACCCAGCG TTTTGAAGTG
CTCAAGACGT CCCATAACCT CAAGGACCAT GTCGCGGTCA TCATGGGCTA TGCCGACGAG
CTGGAGCTTT TGGGGACCGA TCCCCGGTCC CAGCGCCGCC GTTTGGAGAT TCAGGACGCC
ATCGCCAAGG ACATGGCCCG CATCGAAAGC GATCCGGTCA TCGTCAGCAC CATGGAGAAG
ATCTCCGCCA TGCGCGAAGA CGTGGCCAAG AAGGTCGGCC TGCAGCAGGA AATGGACACC
GTCCGCACCC TGCCTGAGAA AATCCAGGAG ATTCTCAAGT CGCGCGGCTA TCGCAGCGGC
AAGGAACTTT ACATCCAGAG CCTGGCCCAG GGCCTGGCCC TTTTCTCCAT GGCCTTCCAC
GGAAAGACCA TTGTTTACCG CACCACGGAC TACAAGACCA ACGAGTATCG CAATCTGCTC
GGCGGCCTGC TCTTCGAGGG GCATGAAGAC AACCCCATGC TCGGATATCG CGGCGTTTCC
CGCAACATCC ACGACTGGGA ACTTGAGGCC TTCAAGCTGG CGCGCGGCGC ATTCGGCGGC
GGCAACCTGC ACCTCATGCT GCCCTTTGTG CGTACCCTGG AAGAAGCGCG GTCCATGAAA
CGGTATCTGG GGCAGGTGCA CAACATTCAT TCCGGCGACT CGGGCCTCAA GATCATCCTC
ATGTCCGAGA TCCCGAGCAA TGCCGTGCTC GCCAAGGAAT TCATCAAGGA GTTCGACGGG
TTCTCCATCG GCTCCAATGA CATGACCCAG CTTGTGCTTG GCACGGACCG TGACAACGCC
CGACTGCGCC ACATCTATGA CGAGGAAGAT CCGGCCGTGG TCTGGGCCAT CCTGACCACC
ATCTTCACCG GTCAGAAGTT CGGCAAGAAG GTCGGCTTCT GCGGGCAGGG CGTGTCCAAC
TCCAAGATCA TCCGGGGCCT GGTCTGCATT GCCGGAATCG TCTCTGCTTC CGTCGTGCCG
GATACCTACC AGCAGACCAA GTTCGACGTG GCCGAGGTGG AAGCCGAAAA CATTCCGCTC
GCGGGCCTTG GCGCGTGGCT CAAGGAACAG CACCTGGAGC GCCTGCACAT GCTTTTGGCT
GAAAATCGCT ACGAGCACAT TTTGAAGAAG AATACCTCCG GTCCCGACCT CATGGATTGG
TATGAAGGGG AGCTGGCCCG CCTGCACGAA CAGCTGCAGT CCAATCTGGG CAGCGTGAAG
GAAGATTTCT ATCGTCAGGA GCTGGCCTCT TTTCGCAGCA TCTTCCACAA GCCGGTCATC
TATTCCAACT GGGATTGGGA GACCACGGTT CTTGATGCCT TGCATCAGGC CGGATTCTCG
GGCTTTGACG AGCAGGTCGA AGCGCTGGCG ACTCAACGCG AAAACATCTG GTAA
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| Protein sequence | MAESDKKSSK KKADTPAEVA TPSARIEQIQ KQLVLTGKDI VTIGEDAELL VGGKNYNTAI
ISTIEGIRAP QFRAISSIAF HKLLDETKVN AALVRTSVDR AYDSMDWTDA EINKDSEFLQ
KFVRKIALDV KEAAKKQEGT LIRLRTFINN VVEGFAVSPE GIDQLRKRSV LVQAAILSVD
LPKDVAEAVR GAYLEICKEA GLENEPVAVR SSAAGEDSRK KAFAGLQDTY LNIVGENYVV
QAYHWDCASA YNLRSMTYRR EAILDAVAKA EQTGDDQIGI KAKQEWAIEN TSLSVCIMRM
INPVISGTAF SADTSTGCRG TSRQDLVSID ASYGLGEAVV SGLVTPDKFY VFQREDGQEI
VIRYMGCKDK RIVYKESGRG TKVETVAEDM AFRWSLSLAQ AESVAKGVRC ISKGYGGMIM
DSEFCIDQWD RLWFVQARPE TRWNEDLEHH PHTIFMRRKE VDPEAAKHAE VLLEGNGASR
GAGQGSVRYL RSALELNKIN KGNILAAERT DPDMVPGMRI AAAIMADAGG DTSHAAITSR
ELGIPAVIGI KRLEKLRTLD NHEVTVDGSR GKIYRGLLPL IDVGGEIDVS KLPATKTKVG
LILADVGQSL FLSRLRDVPD FEVGLLRAEF MLGNIGVHPL ALEAYDLGTL ETVVGTKLEI
LENDLTKIVF EQMAAGIVSL DIKLRSYVGI VTGLARKMEE LTEREGAKGT DEVLAIHRQL
RELDKKLDEH LEFATQRFEV LKTSHNLKDH VAVIMGYADE LELLGTDPRS QRRRLEIQDA
IAKDMARIES DPVIVSTMEK ISAMREDVAK KVGLQQEMDT VRTLPEKIQE ILKSRGYRSG
KELYIQSLAQ GLALFSMAFH GKTIVYRTTD YKTNEYRNLL GGLLFEGHED NPMLGYRGVS
RNIHDWELEA FKLARGAFGG GNLHLMLPFV RTLEEARSMK RYLGQVHNIH SGDSGLKIIL
MSEIPSNAVL AKEFIKEFDG FSIGSNDMTQ LVLGTDRDNA RLRHIYDEED PAVVWAILTT
IFTGQKFGKK VGFCGQGVSN SKIIRGLVCI AGIVSASVVP DTYQQTKFDV AEVEAENIPL
AGLGAWLKEQ HLERLHMLLA ENRYEHILKK NTSGPDLMDW YEGELARLHE QLQSNLGSVK
EDFYRQELAS FRSIFHKPVI YSNWDWETTV LDALHQAGFS GFDEQVEALA TQRENIW
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